KEGG   Clupea harengus (Atlantic herring): 105907057
Entry
105907057         CDS       T09045                                 
Symbol
sf3a2
Name
(RefSeq) splicing factor 3A subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105907057 (sf3a2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105907057 (sf3a2)
Spliceosome [BR:char03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105907057 (sf3a2)
 Complex B
    105907057 (sf3a2)
 Complex C
   U2 SnRNP specific factors
    105907057 (sf3a2)
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus PRP4
Other DBs
NCBI-GeneID: 105907057
NCBI-ProteinID: XP_012690779
Ensembl: ENSCHAG00000010081
UniProt: A0A6P3W631
LinkDB
Position
22:17151665..17154661
AA seq 304 aa
MDFQHRAGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT
KQRDSEMGQQSLLFQIDYPEIAEGIGPRHRFMSAYEQRIEPPDRRWQYLLLAAEPYETIA
FKVPSREIDKAESKFWTHWNRETKQFFLQFHFKMEKLTPMPSGPMPPMGVKRPPPLMSNM
GPRPPHDPMPPPPPGGMHMPPLPPGAPGPPHMHRHMPPHAPMPPMMRPPLPTDGPGMPPP
PPNS
NT seq 915 nt   +upstreamnt  +downstreamnt
atggatttccagcacagagcaggcggtaagacgggcagcggtggagtggcctcctcctcg
gagagcaaccgggaccgcagagagcgcttacggcagctagcgttggagacgatcgacatt
aacaaggatccctatttcatgaaaaatcacttgggttcttatgaatgtaagctttgtctc
accctacacaacaatgagggcagctacctcgctcacacacaaggcaagaagcatcagacc
aatttggctcggagagcagccaaagaggcaaaagaagcaccagcacagcctgcacctgaa
aaggttaaggtcgaggtgaagaaatttgttaaaattggtcggccaggatacaaagttacc
aagcagagggactcagaaatggggcagcagtctcttctcttccagattgattatccagag
atagcagagggcattggacccaggcatcgcttcatgtctgcctacgagcagcgcattgag
ccaccagaccgtcgctggcagtacctgctgttggcagcagagccctatgagaccatcgct
ttcaaggttcctagtcgagagattgacaaagcagagagcaagttttggactcattggaac
agagaaacaaagcagttctttttgcagttccactttaagatggagaaactcacacctatg
ccgagtggtccaatgcctcccatgggtgtgaagcggccaccccctctcatgagcaacatg
ggccctcggccaccccacgaccccatgcctcctccaccccctggtggcatgcacatgccc
cctttgccccctggggccccaggacccccgcatatgcaccgccatatgccaccccatgca
cccatgccccccatgatgcgaccacccctacccacggacggcccaggaatgcccccacct
ccgccgaactcctaa

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