Clupea harengus (Atlantic herring): 105907102
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Entry
105907102 CDS
T09045
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105907102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105907102
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
105907102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
105907102
NCBI-ProteinID:
XP_031431150
Ensembl:
ENSCHAG00000006129
UniProt:
A0A6P8G796
LinkDB
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Position
10:complement(9956038..9974493)
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AA seq
1285 aa
AA seq
DB search
MISENKTFPAAMSRVLSPITVAILFFTLSVAMSEGRARFMHKREWIIPPKWLQENTDYTK
EDFISKIRSDLDEANNRVVSYSLKGIGADRDPVNLFVVNKRTGEVRVTRILDREEIHEYN
LTGVAYFPDGNYAENDLNLRIKVQDVNDNSPVFGTISPGSVEELSPKDTSIMQITATDTD
EPGNPNSKIKYTLTKQEPPGDKMMFKITPDGELRVKEPNLDRETHDSYVLTVEGADLYGA
PGGNTGTGTVVVNLVDVNDNVPTLQLEEYEGNIEENTKNVEVMRIKANDLDIDAINQDIE
YVIVTGNEAGYFSLVMDPHTKEGILMLDKEVDFEDVKDLTLGVGVKNTAPYHESVDGGGV
GSINIGGGGGGGGPGGGGGSGTGGGGGGGSGTGGGGGGGSGTGGGGSGTGGGGGGGSGTG
GGGSGTGGGGGPGGSGTGTGGGSGTGGASGSTTTWTPVTWHGKTYPLKINVKDQPEGPRF
DPKIKAIPISEDGKTVNIKDVIATYPALDGDTGLPAENVRYAKGKDPDNWFTIDPETAEI
RLNKLPDRESPFLQNGTYLAEVLCLTQDMPTKTATGTIAIQVEDFNDHCPELASRLVTMC
TAQEVIYVTAVDPDMKPNGAPFKFTIIPEGTKGQWSVEHFNDTTAILRTHEPVWPGNHKV
TLQIRDQQGEACPDLQELDVSVCTCDDTEACSRRGAGPLGKPGSKLGPAAIGLGFLGALL
LLLIPLLLLFCQCGGAGLGAGGFAEIPFGAKEHLISYHTEGQGEDKEVPVMAIAPHAVDS
GGMIQMASKGGLAAAGPALGGATAGLISSRSTMGGGFYESNVEMNYMDQMMGRMGGGEQG
SSFVSEYREQGAYDQLALPGAFLAHYYSQKAECVAVGSSQKDNLLVYDYEGQGSPAGSVG
CCSLLESDNDLAFLDDLGPKFTTLASVCGGSKTETNVTFSAPPLPKSALTTQSSAISSAT
DFGTINMGVVNDTASSTRVERTITSMEQQRPAPPPSMYLHETMAMPTQTVLVQQQPLYYM
VEPQVQSTVLLAERPPVGLGQGMILVNGSQAATERVMLQGGGLVQGGGLLQGGGLVQGGG
LLQGGALLQGGGVLQGGRLVQGGGLMQGAQGLVMSHGGHLQGAQGLVVQGSGPAQTNLGR
AESLMLLERVGGAGGPALNSSLLKTGSLSGSQMLLLDGAAGQQGGQILQGGGQILQGSQI
IQGGTTLQRGSAGGSQGVMFVQRSGQGSGVSKGLHSVVTSTASLNDSAESSGASTLQLSS
GPSSQKVVVQEREVVTSQSSTRQQQ
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggaaaataagacttttcccgcggcaatgtcacgggttttatcacccatcacc
gtggccattcttttttttacattgtcggtggctatgtctgagggcagagcaaggttcatg
cacaaacgtgaatggatcattcccccaaagtggttgcaagaaaacacagactacaccaaa
gaggattttatctccaagatccgctcagacctggacgaggcaaacaacagggtggtctca
tatagcctgaagggcattggggccgaccgggaccctgtcaatttgtttgtggtgaataaa
aggactggagaggtcagggtcacccgcattctggaccgggaggagatccacgaatacaat
ctcactggagtggcttacttcccggatggcaactacgcagagaacgacctcaatctccgg
attaaggtgcaggatgtcaatgacaatagccctgtgtttggcaccatctcccctggctcg
gtggaggagctcagtccaaaagatacgtccatcatgcagattacggccacagacacagat
gagccaggcaaccctaactctaaaatcaagtacaccctgaccaagcaagagcccccaggg
gacaaaatgatgtttaagatcactccggatggagagctgcgtgtcaaagagccaaacttg
gacagagagacacacgactcctatgttctgactgtggagggggctgatctctatggagct
ccgggaggaaacacaggcacagggacagtcgtggtaaatcttgttgatgtcaatgacaac
gtgccaaccctgcaactagaggagtatgagggcaatattgaagagaacaccaagaatgtg
gaggtcatgcggatcaaagctaatgacctggacatcgacgctataaaccaggacatcgaa
tatgtcattgtcacaggaaatgaggcgggctacttcagccttgtgatggatcctcataca
aaggaggggatattgatgcttgacaaagaagttgattttgaggatgtgaaagacctgaca
ctgggagtgggggtgaagaacacagccccataccacgagagtgtggatggaggaggcgta
ggaagcatcaatataggaggaggcggaggcggcggtgggccaggaggtggtggaggaagt
ggaacaggaggcggaggtggcggaggaagtggaacaggaggcggaggtggtggaggaagt
ggtacaggaggcggaggaagtggtacaggaggcggaggtggcggaggaagtggtacagga
ggcggaggaagtggtacaggaggcggaggtggaccaggaggaagtgggactgggactggc
ggtggatcaggaaccggaggtgcatctggaagtaccaccacatggacccctgtgacctgg
catggcaaaacctaccctctaaagatcaatgtaaaggaccagcctgaggggccaaggttt
gatcccaagatcaaggccatccccatctcagaggacggcaaaacagtcaacatcaaggat
gtcatcgccacctaccccgctttagatggagacacaggactgccagcagagaatgtcagg
tatgcgaaaggaaaagaccctgataactggttcaccattgaccctgaaacagctgagatc
cgactcaacaagctgccagacagagagtccccattcctgcagaacggcacgtacctggca
gaagtgctctgtctgacccaagacatgcccaccaaaacggccacaggcactattgccatc
caggtggaggacttcaatgaccactgcccggagctagcctcccgcctggtcaccatgtgc
acggcccaggaggtgatctacgtcacggctgtggaccctgacatgaaacccaatggcgca
cccttcaagttcaccatcatccctgagggcaccaagggccaatggagcgtcgagcacttc
aatgacaccacagccatcttgcgtacccacgagcctgtgtggcctggaaatcacaaggtg
accctacagatccgggatcagcagggtgaggcgtgtccagacctacaggagctggatgtg
tccgtgtgcacctgcgacgacacagaggcctgcagccgccgcggggcggggccgttgggg
aagcccgggagcaagctaggccctgccgccattggactaggcttcctgggtgcactcctc
ctcctgctcatcccactgctgttacttttctgccaatgcggcggagcaggactgggtgca
ggtggatttgctgaaatcccatttggtgccaaggaacacttgatctcctaccacacagaa
ggccagggggaggacaaggaggttcctgtcatggctatagctccacacgcagtagactcg
ggcggtatgattcagatggccagtaaaggaggcctggccgctgctgggcctgctcttggt
ggagctacagcaggtctgatcagctccaggtccaccatgggtggcggcttctacgagtcc
aacgtggagatgaactacatggaccaaatgatgggccgcatgggcggaggagagcagggc
agtagcttcgtgtcagagtacagagagcaaggggcctacgaccagctggcactcccaggc
gccttcctggcacactactacagccagaaagcagaatgtgtggcagtgggttcctctcag
aaggacaatctgttggtgtacgactatgagggacagggatctcccgctggttcggtcggc
tgctgcagcctccttgagtctgacaacgacctcgccttcctcgatgacctggggccaaag
ttcaccaccctcgcctccgtctgcggaggctccaagaccgagaccaacgtcacgttctca
gctcctccactgcctaaatctgctctgaccacacagtcttccgccatctcctcagcgact
gacttcgggaccatcaacatgggggttgttaacgacacggcatcatccacccgggtagag
aggaccatcaccagcatggagcagcagcgccccgccccacctcccagcatgtatctgcat
gagaccatggccatgcccacccagactgtgttggtgcagcagcagcccctgtactacatg
gttgagccgcaggttcagagcacagtgctgctggctgagaggcccccagtgggtctggga
cagggaatgatcctggtgaacgggagccaggcagccacagagagggtgatgctgcagggg
ggaggtctagtgcagggaggaggtctattgcagggaggaggtctagtgcaggggggaggg
ctgctgcagggaggagcactattgcagggaggaggtgtgctgcaggggggaaggctagtg
caggggggaggtctaatgcagggggctcaggggctggtgatgtcccatggtgggcacctt
cagggagcccaggggttggttgtccagggctcgggccctgcacagactaacctgggacga
gcggagagcctgatgctgctggagcgagtgggaggggcaggggggcctgcactgaactcg
agcctcctgaaaacaggtagcctctctggctcccaaatgctgctgctagatggggccgca
gggcaacaaggggggcagattctgcaggggggagggcagatcttacagggatcgcaaatc
atccagggaggaacgactcttcagagagggagtgcagggggatctcagggtgtgatgttc
gtccagcgctcaggtcaagggtcaggggtcagcaagggcttacacagcgtagtgaccagc
acagcatcactgaatgacagtgcagagtccagcggggcgtccacactgcagctgagcagt
gggccaagctctcaaaaagtggtcgtccaggagagggaagtggtgaccagtcagagtagc
acaagacagcagcaataa
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