KEGG   Clupea harengus (Atlantic herring): 105907106
Entry
105907106         CDS       T09045                                 
Name
(RefSeq) cadherin-2-like
  KO
K06736  cadherin 2, type 1, N-cadherin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    105907106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    105907106
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:char04515]
    105907106
   04090 CD molecules [BR:char04090]
    105907106
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    105907106
Cell adhesion molecules [BR:char04515]
 Cadherins
  Major cadherins
   105907106
CD molecules [BR:char04090]
 Proteins
  105907106
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Stevor DUF2254 GspA_SrpA_N DUF5385
Other DBs
NCBI-GeneID: 105907106
NCBI-ProteinID: XP_012690838
Ensembl: ENSCHAG00000006482
UniProt: A0A6P3W6F2
LinkDB
Position
10:10153248..10179706
AA seq 888 aa
MELNRGAMLTLLAVLQVVVQGQTTLPCQSGFSESVYTSVVTETLMEGQPLLKVRFVDCNR
GSVKLGVDESDFRIDGNGTLYATRTFRVDSKKGQSFALWARDSERKQEWHTHVNLTSQMR
EILFPWKSVVVAGDGSLTRVKRDWVIPPINVPENSRGQFPEDLVTIRSDRDRSGRMRYSV
TGPGADHPPTGIFIINPINGQLSVTKPLDREDISNFHLRAHAVDINGNQIENPIDIVINV
IDQNDNRPEFAHQIWNGTVPEGTRPGTTVMTVTSQDKDDPNMPNGMLRYKILSQQPHSPN
PSMFTINNKTGAIITVAAGLDREKVSQYTLIIQATDMEGNPTYGLSNTATAVIRITDIND
NAPEFTTDTFYGEVQENKEKVIVANLTVSDKDQPNTPAWNAVYRITGGDTSGRFAIITDP
ITNEGRVTVVKPIDYETTRTFTLSVVAENESPLPRSVYPPRASTATVSIRVLDVNEGPQF
DPNPKTIRLEEGIQAGTTIQPYLAHDPDRYMRQSIRYSKIFDPANWVKIDPMSGHISTIA
ILDRESPYVNNNYYNVTFLATDNGNPPASGSGTLQILLLDINDNAPRVFPSEVEMCEKAN
PAGLNITAEDGDMHTNAGPFRFELANRPADVRRNWSLAQISGDHAQLNMKLGFMERGVYE
VPIIITDSGHLPMSNTSYLRVKVCVCDHHSNCVDMERIMAAGIGTGAIIAILICIIILLV
LVLVFVMWLKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPEMDH
ETIKPMGVRRLDERPLHSETQYPIRSAAPHPGDIGDFISEGLRAADGDPTAPPYDSLLVF
DYEGSGSTAGSLSSLHSSISGSDQDYDYLSDWGPRFRKLADMYGGYDD
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggagcttaacaggggcgcgatgctgacgctccttgcagttctgcaggtggttgtccag
ggtcagacgacactaccatgtcagagtggcttcagtgagagtgtgtacaccagtgttgtc
acggaaacgctgatggaaggacagcctctactgaaagtgaggtttgtagactgtaataga
ggttcagtgaagttgggcgttgatgaatcagacttcaggatagacggaaacggaactctc
tacgccacaaggaccttccgcgtggacagcaaaaagggccagagttttgcgctgtgggca
cgggactcggagagaaagcaggagtggcacacacatgtcaacctcacatctcagatgcgg
gagattctgtttccatggaaaagcgtggttgttgcgggagatgggtcgttgacacgagtg
aagagagactgggtcatcccccccatcaacgtcccggaaaactctcgaggacagttccca
gaagaccttgtcacaatccgctcagacagggatcgtagtggacgtatgcgctacagcgtg
acaggaccgggtgcagatcatccccccactgggatcttcatcatcaaccccatcaatgga
cagctgtctgtcaccaaaccactggaccgagaggacatctccaacttccatttacgagca
catgcagtggacattaacggtaaccagattgagaaccccattgacattgtcatcaacgtg
atcgaccagaatgacaaccggccggagtttgctcatcagatctggaatgggacagtaccg
gaggggaccaggccaggtaccactgtgatgactgtaacgtcccaggataaggacgacccg
aacatgcccaatgggatgctacgctacaagatcctgtcccagcagccccacagccccaac
cccagcatgttcaccatcaacaacaagactggagccattatcactgtagcagctggcctg
gatagagagaaagtgtcccagtacaccctaataatccaggccacggacatggaggggaac
ccaacctacggcctgtctaacactgccaccgccgtcatcagaatcacagacatcaacgac
aatgcaccagagtttaccacagacacgttctatggtgaggttcaggagaacaaagagaag
gtgatcgtggccaacctgaccgtgagcgataaggaccagcccaacacccccgcctggaat
gccgtgtatcgtatcactgggggagacacctccggacgattcgccatcatcaccgacccc
atcaccaacgagggccgggtcacggtggttaagcccatcgattatgagaccacgcgcacc
ttcaccctgtccgttgtggcagagaacgagtccccgttgccaaggagcgtctatcctccc
cgagcctccacggcaaccgtgagcatccgtgtgttggacgtgaacgaagggccacagttc
gatcccaaccccaagaccatccgcctggaagagggcatccaagccggcaccaccatccag
ccctatttagcccatgaccccgacagatacatgaggcagagcatcaggtactcaaagatc
tttgaccctgccaactgggtgaagatagaccctatgagtggccacatctctaccatcgct
atactggacagggagtcgccctatgtcaacaacaactactacaatgtcactttcctggca
acagacaatggcaatcccccggcgagtggctctggcacgctgcagatcctgctgctggac
atcaatgacaacgcgccgcgcgtcttcccctcagaggtggagatgtgcgagaaggccaac
ccggcgggcctgaacatcaccgccgaggacggggacatgcacaccaacgccgggcccttt
cgcttcgagctggccaacaggcccgccgacgtgcgccgcaactggtcactcgcacagatc
agtggtgatcacgctcagctgaatatgaagttaggcttcatggagaggggcgtgtatgag
gtgccaatcatcatcacagactcaggacatctgcccatgtccaacacctcctacctgcgt
gtcaaggtgtgtgtgtgtgatcaccatagcaactgtgtggacatggagcgtatcatggcg
gcagggattggaactggagccatcatagccattctcatctgtatcatcatactactagtg
ctggtgctggtgtttgtgatgtggctgaagagacgggataaggagcgtcaggccaagcag
ctgctcatcgaccctgaggacgatgtgcgagacaacatcctcaagtacgatgaggaggga
ggcggagaggaggaccaggactatgacctgagccagctgcagcagcctgagatggaccac
gagaccataaagcccatgggggtgaggaggctggatgagaggcccctgcactcagagacc
cagtaccccatccgctccgccgccccacaccccggagacatcggagacttcatcagcgag
ggcttgcgagcggcggacggcgaccccacggcacctccctatgactccctgctggtgttc
gactacgagggcagtggctcgacggccggctccctctcctcgctgcattcgtccatcagc
ggcagcgaccaagactacgactacctcagcgactggggcccccgcttccgcaagctggcc
gacatgtacgggggctacgacgactag

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