Clupea harengus (Atlantic herring): 105907106
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Entry
105907106 CDS
T09045
Name
(RefSeq) cadherin-2-like
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105907106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105907106
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105907106
04090 CD molecules [BR:
char04090
]
105907106
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
105907106
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
105907106
CD molecules [BR:
char04090
]
Proteins
105907106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Stevor
DUF2254
GspA_SrpA_N
DUF5385
Motif
Other DBs
NCBI-GeneID:
105907106
NCBI-ProteinID:
XP_012690838
Ensembl:
ENSCHAG00000006482
UniProt:
A0A6P3W6F2
LinkDB
All DBs
Position
10:10153248..10179706
Genome browser
AA seq
888 aa
AA seq
DB search
MELNRGAMLTLLAVLQVVVQGQTTLPCQSGFSESVYTSVVTETLMEGQPLLKVRFVDCNR
GSVKLGVDESDFRIDGNGTLYATRTFRVDSKKGQSFALWARDSERKQEWHTHVNLTSQMR
EILFPWKSVVVAGDGSLTRVKRDWVIPPINVPENSRGQFPEDLVTIRSDRDRSGRMRYSV
TGPGADHPPTGIFIINPINGQLSVTKPLDREDISNFHLRAHAVDINGNQIENPIDIVINV
IDQNDNRPEFAHQIWNGTVPEGTRPGTTVMTVTSQDKDDPNMPNGMLRYKILSQQPHSPN
PSMFTINNKTGAIITVAAGLDREKVSQYTLIIQATDMEGNPTYGLSNTATAVIRITDIND
NAPEFTTDTFYGEVQENKEKVIVANLTVSDKDQPNTPAWNAVYRITGGDTSGRFAIITDP
ITNEGRVTVVKPIDYETTRTFTLSVVAENESPLPRSVYPPRASTATVSIRVLDVNEGPQF
DPNPKTIRLEEGIQAGTTIQPYLAHDPDRYMRQSIRYSKIFDPANWVKIDPMSGHISTIA
ILDRESPYVNNNYYNVTFLATDNGNPPASGSGTLQILLLDINDNAPRVFPSEVEMCEKAN
PAGLNITAEDGDMHTNAGPFRFELANRPADVRRNWSLAQISGDHAQLNMKLGFMERGVYE
VPIIITDSGHLPMSNTSYLRVKVCVCDHHSNCVDMERIMAAGIGTGAIIAILICIIILLV
LVLVFVMWLKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPEMDH
ETIKPMGVRRLDERPLHSETQYPIRSAAPHPGDIGDFISEGLRAADGDPTAPPYDSLLVF
DYEGSGSTAGSLSSLHSSISGSDQDYDYLSDWGPRFRKLADMYGGYDD
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaacaggggcgcgatgctgacgctccttgcagttctgcaggtggttgtccag
ggtcagacgacactaccatgtcagagtggcttcagtgagagtgtgtacaccagtgttgtc
acggaaacgctgatggaaggacagcctctactgaaagtgaggtttgtagactgtaataga
ggttcagtgaagttgggcgttgatgaatcagacttcaggatagacggaaacggaactctc
tacgccacaaggaccttccgcgtggacagcaaaaagggccagagttttgcgctgtgggca
cgggactcggagagaaagcaggagtggcacacacatgtcaacctcacatctcagatgcgg
gagattctgtttccatggaaaagcgtggttgttgcgggagatgggtcgttgacacgagtg
aagagagactgggtcatcccccccatcaacgtcccggaaaactctcgaggacagttccca
gaagaccttgtcacaatccgctcagacagggatcgtagtggacgtatgcgctacagcgtg
acaggaccgggtgcagatcatccccccactgggatcttcatcatcaaccccatcaatgga
cagctgtctgtcaccaaaccactggaccgagaggacatctccaacttccatttacgagca
catgcagtggacattaacggtaaccagattgagaaccccattgacattgtcatcaacgtg
atcgaccagaatgacaaccggccggagtttgctcatcagatctggaatgggacagtaccg
gaggggaccaggccaggtaccactgtgatgactgtaacgtcccaggataaggacgacccg
aacatgcccaatgggatgctacgctacaagatcctgtcccagcagccccacagccccaac
cccagcatgttcaccatcaacaacaagactggagccattatcactgtagcagctggcctg
gatagagagaaagtgtcccagtacaccctaataatccaggccacggacatggaggggaac
ccaacctacggcctgtctaacactgccaccgccgtcatcagaatcacagacatcaacgac
aatgcaccagagtttaccacagacacgttctatggtgaggttcaggagaacaaagagaag
gtgatcgtggccaacctgaccgtgagcgataaggaccagcccaacacccccgcctggaat
gccgtgtatcgtatcactgggggagacacctccggacgattcgccatcatcaccgacccc
atcaccaacgagggccgggtcacggtggttaagcccatcgattatgagaccacgcgcacc
ttcaccctgtccgttgtggcagagaacgagtccccgttgccaaggagcgtctatcctccc
cgagcctccacggcaaccgtgagcatccgtgtgttggacgtgaacgaagggccacagttc
gatcccaaccccaagaccatccgcctggaagagggcatccaagccggcaccaccatccag
ccctatttagcccatgaccccgacagatacatgaggcagagcatcaggtactcaaagatc
tttgaccctgccaactgggtgaagatagaccctatgagtggccacatctctaccatcgct
atactggacagggagtcgccctatgtcaacaacaactactacaatgtcactttcctggca
acagacaatggcaatcccccggcgagtggctctggcacgctgcagatcctgctgctggac
atcaatgacaacgcgccgcgcgtcttcccctcagaggtggagatgtgcgagaaggccaac
ccggcgggcctgaacatcaccgccgaggacggggacatgcacaccaacgccgggcccttt
cgcttcgagctggccaacaggcccgccgacgtgcgccgcaactggtcactcgcacagatc
agtggtgatcacgctcagctgaatatgaagttaggcttcatggagaggggcgtgtatgag
gtgccaatcatcatcacagactcaggacatctgcccatgtccaacacctcctacctgcgt
gtcaaggtgtgtgtgtgtgatcaccatagcaactgtgtggacatggagcgtatcatggcg
gcagggattggaactggagccatcatagccattctcatctgtatcatcatactactagtg
ctggtgctggtgtttgtgatgtggctgaagagacgggataaggagcgtcaggccaagcag
ctgctcatcgaccctgaggacgatgtgcgagacaacatcctcaagtacgatgaggaggga
ggcggagaggaggaccaggactatgacctgagccagctgcagcagcctgagatggaccac
gagaccataaagcccatgggggtgaggaggctggatgagaggcccctgcactcagagacc
cagtaccccatccgctccgccgccccacaccccggagacatcggagacttcatcagcgag
ggcttgcgagcggcggacggcgaccccacggcacctccctatgactccctgctggtgttc
gactacgagggcagtggctcgacggccggctccctctcctcgctgcattcgtccatcagc
ggcagcgaccaagactacgactacctcagcgactggggcccccgcttccgcaagctggcc
gacatgtacgggggctacgacgactag
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