Clupea harengus (Atlantic herring): 105907109
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Entry
105907109 CDS
T09045
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105907109 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907109 (atf6)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
105907109 (atf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
ZapB
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
105907109
NCBI-ProteinID:
XP_012690840
Ensembl:
ENSCHAG00000009211
UniProt:
A0A6P3W6F7
LinkDB
All DBs
Position
10:complement(10470568..10528202)
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AA seq
652 aa
AA seq
DB search
MASALTLDFEDHLDHQHTAMNNVSDTGNIYIDQDGEWDISLFDELEGLGDADELFKALEG
VPYAGEVPELDFDMDLPPWSPDTSGDASSTCTDGDVEAASLSPAHTLSSLHSPLSVQAHS
PYSLPDEALSPQPQASPLSVCSDSSGFSELPPERPPPKRTNQTPRAKPVKRPIQQSPKVS
IQPRPVITAAAPLQAKTIILQALQPIQPLQPVLPMVKPARVTIQPAPPAGRPVILPQPAQ
VFQIQTAQTIPTRVVTLSTLVPEPRIPSAAPPVVNMTLQSPASVQSSYYGSDEESGASRR
QMRMIKNRESASQSRKKKKEYLLTLESRLKLALSENALLKNENGTLKEQLNGLMSENTVL
KTTAPKRRAVCLMVLVVFLVFNIGPMSKYIDSDGSKVSISGAHTGRHLLGFTQDTNTPEE
SPVSSRVEESVSDEKALMVVKKTPLVFGAPPPCQPAVNRTKCIKLAHELRGWVHRHEVER
TKTRRQSNTQTKSRTILKENGNKDEVTQILPVQYTESAERISGNELQVYYAPHRTYNDFF
DEINRRGDTFYVVSFRRDHLLLPATNHNKGSRPKMSVVLPAMNINDSVINDKEFEVMMQI
DCEVMNTRILHIKTSSIPPFLKANQTHSDTFYHPNPAGGQPTPTVGVLVGSA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctttaacgttagacttcgaagatcacctagatcatcagcatacagcaatg
aacaatgtcagtgatacggggaatatttacattgaccaggatggcgaatgggacatcagc
ctgtttgatgagctggagggcctcggcgatgcagatgagctcttcaaagccttagagggg
gttccctatgctggcgaggttcccgaactggactttgacatggacctgcctccctggagt
cctgacaccagcggagatgccagtagcacctgtacagatggagacgtggaggcggcgtca
ctctctcctgcacacacactcagctctttgcactcccccctgtctgtccaggcccactct
ccatactccctaccggatgaggctctctctcctcagcctcaggcgtccccgctctctgtc
tgctcggactccagcggcttctctgagctcccccctgaaagaccaccacccaagaggacc
aatcagactcctagagccaagccagtgaagaggcccattcagcagagccctaaggtgtcc
atccagcccaggcctgtgatcacggctgccgctcccctgcaggccaaaaccatcatcctg
caggccctccaacccatccagcctctgcagccagtcctgcccatggtcaagcctgccaga
gtcaccatccaaccagctccacctgcaggacgtcctgtgatattaccccaacctgctcag
gtgttccaaatccaaactgctcagaccatcccgaccagagtggttaccttgtcaacactg
gttccagagccacggataccttctgcggccccaccagtggttaacatgacactccaaagt
cccgcctctgtccaaagctcctactacggctccgatgaggaatcaggcgcgtcgcggcgt
cagatgcgcatgatcaagaaccgtgagtcggcctcgcaatcgcgcaagaagaagaaggag
tacctgctgacgctggagtcccgcctgaagttggcgctctccgagaacgccctgctcaag
aacgagaacggcaccctgaaggaacagctgaacggcctcatgagcgagaacactgttttg
aaaaccactgctcccaagaggcgggctgtgtgtctcatggtgctcgtggtcttcctggtt
tttaacattggaccaatgagtaagtacatagactctgatggctccaaagtttctataagt
ggagctcacacaggaagacatctgctgggcttcacccaggacacaaacacccctgaggaa
tcgccagtgtccagcagggtggaagagtctgtgtcagatgagaaggctctgatggtggtg
aagaagaccccccttgttttcggagccccgcccccctgccagccggccgtcaacaggaca
aagtgcatcaagctggctcatgaactgagaggttgggtgcacaggcacgaggtggagcgg
actaagaccagacgtcagagtaacacacaaacgaagagcaggaccatcctgaaggagaat
gggaataaggatgaggtgacccagattctgcctgtccagtacacggagtcagcagagaga
atttcaggcaatgagttgcaggtgtattacgcccctcaccgcacctacaacgacttcttc
gacgagattaaccgaaggggtgacaccttctacgtggtatctttccgcagggatcatctg
ctgcttcctgccaccaaccacaacaaaggaagccggcccaagatgtccgtggtgctgccg
gccatgaacattaatgacagtgtcattaatgacaaggagtttgaggtgatgatgcagatt
gactgtgaagtgatgaacacccgcatcctgcacatcaagacctccagtatcccacctttc
ctgaaggccaatcagacccacagtgacaccttctaccaccccaaccctgctgggggccag
cccacgcccaccgtcggagtcctggttggctctgcatga
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