Clupea harengus (Atlantic herring): 105907130
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Entry
105907130 CDS
T09045
Symbol
zbtb4
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 4
KO
K10510
zinc finger and BTB domain-containing protein 38
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105907130 (zbtb4)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907130 (zbtb4)
04121 Ubiquitin system [BR:
char04121
]
105907130 (zbtb4)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105907130 (zbtb4)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
105907130 (zbtb4)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105907130 (zbtb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-H2C2_2
PRP38_assoc
Zn_ribbon_PriA
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
105907130
NCBI-ProteinID:
XP_042566449
UniProt:
A0A8M1KXY6
LinkDB
All DBs
Position
18:complement(7252676..7266814)
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AA seq
1853 aa
AA seq
DB search
MVSQAELWDPHHSSSVLSELNQQLLADLAPPFDVTLAAANDTEVHAHKSIRAARGSYFRQ
LSSSLATSTPLGTSSTTTPGKERVVEPSXLRPRALSDLPDYVYTSRVSQRDSGGARRLSE
AADCSLAVPFLVGSVKESEQMKSKQLKGNRMGEESSPADVGQTTKISLRFPLSAGLPVPM
AQNHCPIPLSLPSSVAEHEMSLAEGTRKMDSLTDKQLPRMPMKHNNLPAAPRSSSSSCSS
SSSSPMDLTASVRKDSKSTPAFSTAGPDPHFQSLPPGPAAGYSGDASEGSLPHGTNPEHS
TTETAHILFKLSTKAFQGQGARGSERRKDHGSKSKQAKGGTPRRELSVAQPADPPASPPP
LSPSPSLSPPPSPPSVAPSLPGDASQEIMKPELLCGVCHRLFSTASSLTVHMRLHRGSRA
LSCRHCGKAFIHNKRLQSHEAMCKQALPALPIQPKQEPLNEAEELGEQEAGEGEGEGEGE
SAEPGHVTGAGRPMKKGRGFAGRHRISFPPGEEGLLSEDDHFIKVVDGHIIYFCTVCERS
YMTLSSLKRHSNVHSWRRKYPCHFCDKVFALAEYRTKHEVWHTGERRYQCIFCWEAFPTY
YNLKTHQKAVHGISPSLISSEKTANGGYKQKVNALKLYRLLPMRAQKRPYKTYSHSMAEG
MLLPTDPLSLDCALPTTLDAGELQALLADAHPTGLKEDPDAFPISLSLGQDEIATLAATH
GGMPVSGREGSLSESGPAGGNGRPPKLPKGDCSPATAASSVITYGHTKPSVIVHGTAVSS
SVIVHSNQISAGSAQSPPNSSPPSPLPSGQPMVRTSQRSTKKHAQKESTDTHRETGNASE
HTDISESRQTGTGKAHHKVRKSHGKNDSHSSKPSSHGAVPEAKGTGPLCQITVRIGEEAI
VKRSISETDLMRNKDPSACKAKKGDASAVEEQRELRHTHHHRHKHRSHRSSSKEEAEGEP
RKKTPKTPTKVREYYFRQEVREEDSDQDGEDNLWRPYYSYKPKRKAPHMQKVKSWQRKLH
YKRSLRQMQKGERLANHKDNRVEEEEEEEEEEEELGDDGVDRDEQALKTEEEERDIMNQE
RESVENNRDTPSAPLKESEDTVMEKESQSMPDPPAPNPKPFLDTSKPSTDRQERSWSVGG
QTAECGTCGRWFSSVRKRDKHELTHLIEFVCMLCQASFHSQSKLEEHQKAQHPKPCPKSP
PALPALPSAAVDEAMETDAGCDQARDITERDGPARVGRRPFVRHVCSQCNKVCKTATALS
RHLRRHELGSPAMAAEAQLSMPSVSPKLADRSLSEPQETNSDHVQPTPVINYTTLTTPQE
QKQVFAECVKSSSLSQPCEAQAENQMPESSDVPEAVAVDRSPSVQSLHQTIQSPPPSPQC
TKTATPDSLTNSTADGHRFLSSPNLHSVLVLNGAECLDYRTPEKKSLDVLDQRKSSPVRR
ATERPNSSYSVMPAKPQVTSDNALSRLLITEPNRGANVERESTLETEKQGNRGPHVLFNN
AQVAQDLRVPALSCSPCDNQAQDFTMPTILAREREREREREREREREWEREREGRERERE
RDRDREKERERERERERERERERERVQMTAGLHNFQNEQQHREQEMTLLVPKEEPVSPAP
SPKCSVVQTTTSNTLQRRSKSPRHSPSTADLARAKQEATHSRRLGRQGLMLPTSSTGANE
RPSAHALLLPRVSEAKRESAPSSITGDPQRENRGYPVQDFPLPLIVPGGFRSGKKQEDNF
MSYPASPFPFASLGKMVSPGDLAKLPFYRDPYALLCAPQLLAYPYNLATLPMAMNMMGAS
GDKAEPLPFLPALFNYAAATAPYTGIAPHTLVANPSFYGGSSASGKKRDSANP
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccaggcggagctatgggacccccatcactccagcagcgtcctgtctgagctg
aatcagcagctccttgccgaccttgccccgccgtttgacgtcacactcgccgctgccaac
gacacagaggtccacgcccacaagagcatccgagctgcccgcggctcatacttccgccag
ctatcgtcttcccttgccaccagcactcccttgggtacttcctctaccaccactcctgga
aaagagagagtggtggagccctcctgactccggcctagggcactttccgacctgccggac
tacgtgtacacgtctcgcgtctcccagcgagactccggaggtgccaggcgtctgtccgag
gcggcagactgcagcctcgcggtgcctttcctcgtcggatcggttaaggagagcgagcag
atgaaaagcaaacaactgaaagggaacaggatgggggaggagagcagcccggcggatgtc
ggccaaaccacgaaaatatctctccgctttcccctcagcgcagggttgccagtccccatg
gcacaaaaccactgccccatcccactctccctgccctcatctgttgccgagcatgagatg
agcctcgcagaggggacgaggaaaatggattctctcacggacaagcagctgccccgcatg
ccaatgaaacacaacaacttgccagccgctccacgctcctcttcctcctcctgctcttcc
tcttcctcctctcccatggatctaactgcgtcagtcaggaaggactctaaatccactcca
gccttttccacagctggtcctgatccccattttcagagcctcccccctggcccagcggcg
ggctattcaggggatgcctctgaggggagccttccacacggcaccaacccagagcactcg
accacggagacagcacatatccttttcaaactgagcaccaaggccttccagggccagggg
gccagggggtcggagaggaggaaggaccacggctccaaaagcaaacaagccaaggggggg
accccgcggagggagctgagtgtcgctcagccagctgacccccctgcttctccccctccc
ctctccccctccccctccctcagcccccctccttcccctccgtctgttgctccctctctg
cctggtgatgcctcccaggagatcatgaagccggagcttctgtgcggggtgtgccaccgt
cttttcagcaccgcctcctccctcaccgtccacatgcggctgcaccggggcagccgggcg
ctcagctgccgccactgtggcaaagccttcatccataacaaaagactgcagtcccatgag
gccatgtgcaagcaggccttgccagctctccccatccagcccaaacaggaacccctcaat
gaggcagaggagttgggggagcaagaagcaggggagggggagggggagggggagggggag
tcggctgagccaggtcacgtgaccggagctggccgccccatgaagaaaggacgtggcttt
gcggggcgccatcggatttcttttcctcctggcgaagaagggctgctaagcgaggacgat
cacttcatcaaggttgtggacggccacatcatctacttctgcactgtgtgtgagcggtcc
tacatgaccctgtccagccttaagcggcattccaacgtccactcctggcgccggaagtac
ccctgccacttctgcgacaaggtctttgccctggcggaataccgcaccaagcacgaggtc
tggcacacgggggagcgccgctaccagtgcatcttctgctgggaggccttccccacctat
tacaacctcaagacccaccagaaggctgtacatggcattagccccagcctcatctccagt
gagaaaacagcaaatggaggctataagcagaaagtcaatgccctcaagctctaccgcctg
ctgcccatgcgagcgcagaaaaggccctataagacctacagccactcgatggcggaaggc
atgttgctgcccactgatcctctgtctttggactgtgctctgccgaccaccctggatgct
ggcgaactgcaggccctgcttgctgatgctcacccaacgggtctgaaggaagacccagac
gcattccccatcagcttgagtctgggtcaggatgaaatcgccacgctggctgccacccac
ggaggtatgccagtaagcgggagagagggaagtttgtcagaatcagggccggctggtggc
aatggcaggcctcccaaacttcccaagggggactgcagtccggccacagctgcttcctcc
gtcatcacctatggacacactaagccgtccgtcattgtgcacggcacagcggtctcatct
tctgtaattgttcacagtaatcagatctcagctggcagtgcacaaagccctccaaacagc
tctcccccctcccctctgcctagtgggcagccaatggtaagaacttctcagcgctcgaca
aagaaacatgcacaaaaagagtccacggacacccacagggagacgggcaatgcctcagag
cacacagacatctctgaaagcagacaaacagggacaggtaaagctcatcacaaggtgcgc
aagtcgcacggcaaaaatgactcccactcgagtaagccatccagccacggggctgtgccc
gaagccaagggaacagggccgctgtgccagatcactgtacgtatcggagaggaggccatc
gtcaaacggagcatctctgagacagacctcatgaggaacaaagacccgtcggcctgcaaa
gccaaaaagggtgatgcctctgcagtggaggagcagagggaactccgtcacactcatcac
catcgccacaaacaccgctcccaccggagctccagcaaggaggaggcagagggggagccc
cgaaagaaaacccccaaaactccgaccaaggtgagggagtattactttcgccaggaggtg
cgagaggaggacagcgatcaggatggagaggacaacctctggaggccatattactcttac
aagcccaagcgcaaagcccctcacatgcagaaggtgaaaagctggcagcgtaagctacac
tacaagcgatcactgaggcagatgcagaaaggtgagagactcgcaaaccacaaagacaat
cgggtggaggaggaggaggaggaggaggaggaggaggaagagctgggagatgatggggtg
gacagggacgagcaggcacttaagacggaggaggaggagcgtgacatcatgaaccaagaa
agggagagtgtggaaaacaacagagacacaccttctgctcctttgaaagagagtgaggac
actgtgatggaaaaagaaagccagtctatgcctgacccgcctgctcctaacccaaagccc
ttcctggatacctcaaagccatccacggaccgacaggaacggagctggtcagtgggagga
cagacagcagagtgtggcacctgtggccggtggttctccagcgtgagaaagcgggacaaa
cacgagctgacccatttgattgagtttgtgtgcatgctgtgtcaggcctcgttccactcc
cagtccaagctagaggagcatcagaaggcccagcaccccaaaccctgtcccaagagcccc
cctgctctgcctgcgctgccttcagcagctgtggacgaggccatggagacagatgccggt
tgtgaccaggccagggacattacagagagggatggtccggctcgagtgggtaggagacct
tttgtcaggcacgtctgttcgcagtgtaacaaggtgtgcaagacggccacggcactgagt
cgccacctcaggaggcacgagttaggcagcccagccatggcagcagaggcccaactgagc
atgcccagtgtgagcccgaaactggcggatcggtctctgagtgagccgcaagagaccaac
agtgaccacgtgcagccgacgccagtcattaactacactacgttaactacaccacaagag
cagaagcaggtgttcgctgaatgtgttaagtcgtcaagtctgagccagccttgtgaagcc
caagcagagaaccaaatgccagagtcctctgatgtcccagaggcggtggccgttgacaga
agtcccagtgtacaaagcctgcaccagactatacaaagcccccctccgagtccacaatgt
acaaagacagctacaccagacagcctcaccaactccacagcagatggccataggtttttg
tcatcacccaatctgcacagtgttttggtcctgaacggagcggagtgtttagactacaga
acacctgaaaagaaaagcctggatgttcttgatcagaggaaaagcagtcctgtccggaga
gcgacagagaggccaaacagctcgtattctgtcatgccagctaaaccccaggtaacatct
gacaatgctttatctcgactccttataacagagcccaacaggggggcaaatgtagagcgt
gagagtaccttagaaacagagaaacagggtaataggggcccccatgtgctttttaacaat
gcacaagtggcccaggatctcagggtccctgccttgtcctgcagcccttgtgacaaccaa
gcacaggactttaccatgccgaccatcctggccagggagagggagagggagagggagagg
gagagggagagggaaagggagtgggagagggagagagagggacgagagagggagagggag
agggatagagatagggagaaggagagggaaagggagagggagagggaaagggagagagag
agggaaagggaaagggtgcaaatgactgctgggctgcacaacttccaaaacgaacaacag
cacagggagcaagagatgactctgctggtgcccaaagaggagccagtgagcccggcgccg
tctccaaaatgctctgtggttcaaaccacaacaagcaacactttgcagaggcgttcaaag
tcaccccggcactccccaagcaccgcagatctggcgcgggcgaaacaggaggcgacgcat
tcccgtcggctcggccggcaggggctcatgttgccaactagttcaaccggggccaacgag
cgcccctccgcccacgctctgctgctccccagggtgtctgaggcgaagcgggagagcgct
ccctcaagcatcactggggacccccaaagggagaacagaggctaccccgtccaggacttc
cctttgcccttgattgtgcccgggggctttcgctccgggaaaaaacaagaggacaacttc
atgtcttaccctgccagcccctttccctttgcatcactgggcaagatggtttcccccgga
gatttggccaaactgcccttctaccgtgacccatacgcgctactgtgtgccccacagctg
ctagcctacccctacaatctagccaccctgcccatggccatgaacatgatgggggcatct
ggggacaaggctgagcccctgccctttctgcctgctctcttcaactatgccgcggccact
gccccttacacgggcatcgcaccacataccttggtggcgaaccccagcttctatgggggc
agcagtgccagcggcaaaaagagggacagtgccaacccatag
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