Clupea harengus (Atlantic herring): 105907152
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Entry
105907152 CDS
T09045
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105907152
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
105907152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_NWD2_C
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
AAA_16
NPHP3_N
Beta-prop_TEP1_2nd
AAA_22
Beta-prop_RSE1_2nd
PQQ_2
AAA_28
Beta-prop_WDR19_1st
NPHP3
AAA
TniB
Motif
Other DBs
NCBI-GeneID:
105907152
NCBI-ProteinID:
XP_031440902
Ensembl:
ENSCHAG00000001829
UniProt:
A0A6P8GQA9
LinkDB
All DBs
Position
18:complement(8003660..8064092)
Genome browser
AA seq
1739 aa
AA seq
DB search
MWPSGVGSRQPNPRDSALRRAAISGNVLALPPFHVPTGRAVRVFICANPDDTEAERNALK
EHVYPKLRDFCRENYGVEFQVVDLYWGVDPEEWDSPELQRLRMKLLEDCLKTSAGPCFVG
LVGEKYGSIRVPGEVESAEFEMILDAAVESALDTRLLEEWYCRDENAVPPTYYLKPKAQM
LKNYQNSMESNSAAKTKNDKAWRGVSDEIKKIFRAAVLQLQEKGTMKAPQAKKFLCSPLE
DELDFALGKQTPAFLKKCVCYIRKIANFERHAKLPEMARYMDIVTDAEHVMRNQEAYERL
LKVRDEFIPTVVAASNLRVYSSVTHCDMKMGYSQEVESHYVEGLCKQFYEDMVDIIQATV
QQNFDAETDPLYDELLQHLSLCKTFSSIYEYKSEALDLVQEYLYPVKGTRMSPLVVFGGP
CTGKTLLLSEVAKQAYTWLQKEMGPETDPVIIVRFIGSTDFSTDLRTLLQSICEQIAINY
RCLIHFLPQKIQEMKELLVNLLGESSFHRPLVIVLDALEQLSDADDARKLWWLPAHLPRT
VRIVVSTLPNKHGILQKLHTLIHDDFRYVELTQRDRKACSQTLKQQLLGVKRKVTSGQQI
YVNEALAKCTLPMFVNLIYREVVHWRSHKDVDDTSLSSTVHDSIERLFFSVEDKLGSRFV
FRALGYVTMSKAGLTEMELEDILSLDNSVLGDIMVSSNLKNPLRVSYDLIARLREELDGY
LIERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGAWAGGRKKIFHCD
NNHFAHFSHHKNPQQPHNHPHQPSQHGHDKGSAEKHSYDRQTPEQPWVFQCNLLEPDIFF
VNHRKMTELVYHLTRSGRTDDLMYGVIMNFSWLYTMIKIGHFDKVLTDIDLAYSYSQEKE
LKFLATTLRSIKVKVTRNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYCSIVPL
HSSMDVTYSPERLPLCSSYMQIVEVLPTLAPNIVIVALEDGSVSTWDVESRQLLRQIDTA
RSVVLGIRLTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEVKCSKHCGVTGGVAFINGFT
LSSQHALAWLEASKEVNVIDLVYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLNTTTIF
HLGSGDKLATMTSEFSGGFVKSILVLDTLNQMVMIDNEGSLSVWNTKEVTNPRLMEDYDC
RGDDSEVVGIELSEDQRSILICKAMSIEVLDTKVWKMVEKFKAKRTERFVAAVLSKNGQS
IVASMENTSSIFVWRRDSGQCMASLIEISGAIVKLIKSTHHNLLLSVASSGVLSVWDIDI
ITAMSNIDKTGKRIQILQLTGREDFVFTMDGSESIHKWNFSTGFIEMVFKHEGLVENCVL
TTSGDLMVTSDDKSSQYIWQTATGENIFRINGQKITQLLITHNDQFVVSLCEQNASRVWR
LATGHKVCNILVTLQHALITTANTFLVGSTKNKLLAVSLWSGSVSKKFICDDGITIVNFK
LIPDCPDYVVFITSTETVFIWSVADESVCRRVQMPANFLKNLEDFQISPNGKLGIVSKGD
ENINVLDLHSGKLRLVHAAGVIWRQKLSRDGRYLVYICFRSCEEDDEAGVVSNLIVMRLA
DGKSIGTCSLYKTPTFLCLSQRALNIIVGFEDGSIGTYTVVDRVDAALKIKIATSNSRQI
VNNATQKVRPKCSTHAFKTVADCIWRESTEVFSRDSPINLSDSGEAETTTPTKKSELLQ
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgtcaggagtgggtagcaggcaacccaatcctcgggattccgcgcttcgcagg
gcggccatcagcggcaatgtccttgcgctcccacctttccacgtccccactggcagggcc
gtccgggtcttcatctgcgccaatcccgacgacacggaagcggagcggaacgcgctgaag
gaacatgtctaccccaagttgcgcgacttctgccgggagaactatggcgtcgagttccag
gtggtggatctgtattggggagtggaccctgaggaatgggacagccccgaattgcagcgt
ctgcggatgaagcttctagaagactgcctgaagacttcggcgggtccatgctttgttggt
ctggtgggggagaagtacggcagcatccgcgtgcctggggaggtggagtcggccgagttc
gagatgatcctggacgcggcggtggagtcggccctcgacacgcgcctcctggaggagtgg
tactgccgggacgagaatgcggtgccgcccacctactacctcaagcccaaagcccagatg
ctcaagaactatcagaactcaatggagtcgaacagtgccgccaagaccaagaacgacaaa
gcgtggcgtggcgtctcggacgagatcaagaagatcttccgcgcggccgtgctgcagttg
caggagaagggaaccatgaaggctcctcaggccaagaagttcctctgctcacccctggaa
gacgagctggacttcgctctgggcaagcagacaccggctttcctgaagaagtgcgtgtgc
tacatccgcaagattgccaactttgaacgccacgccaagctgcccgagatggcacgctac
atggacattgtcaccgacgccgagcacgtcatgcgcaaccaggaggcttacgagcgtctg
ctcaaggtccgcgacgagttcatccccaccgtggtagcggcgtccaacttgcgcgtctac
tcctccgtcacacactgcgacatgaagatgggctactcccaggaggtggagagccactat
gtggagggcctgtgcaagcagttctacgaagacatggtggacatcatccaggccacggtg
cagcagaacttcgacgccgagacggacccgctgtacgacgagctcctgcagcacctgtcg
ctctgcaagaccttctcgtccatctacgagtacaagagcgaggcgctggacctggtgcag
gagtacctctacccagtgaaggggacgcgcatgagcccgctggtggtgtttgggggaccc
tgcacggggaagacgctgctactctccgaagtggccaaacaggcttacacatggctgcag
aaggaaatgggcccagaaaccgacccggtcatcatcgttcgcttcatcggcagcactgac
ttctccacagacctacgcaccctgctgcagagtatctgcgagcagatcgccatcaactac
cgctgcttgatccacttcctgccccagaagatccaagagatgaaagagctcttagtcaac
ctgctgggggagtcgtccttccaccgacccctggtcattgtcttggatgcactggagcag
ctttcagatgcagacgacgctcggaagctgtggtggctgcccgcacatttgccccgcacc
gtccggattgtggtgtctaccttgcccaacaaacatggcattctccagaagctacacacc
ctgatccacgatgatttccggtacgtggagttaacccagcgtgaccgtaaagcctgcagc
cagacactaaagcagcagctcctcggtgtcaagagaaaggtcacctcaggccagcagatc
tacgtaaacgaggcgctggcaaaatgcactctgcctatgttcgtaaatctcatctatcgg
gaggtggtacactggcggtcgcacaaagatgtggatgacacatcattaagctccacggtg
cacgacagcatcgagcgtctcttcttctctgtggaggacaagctgggctctcgatttgtc
ttccgggcattgggctacgttaccatgtccaaagctggactgacagagatggaacttgag
gatattctctccttggacaacagtgtcctgggtgacatcatggtaagttccaacctcaag
aacccactcagggtctcctatgacctcatcgccagactgagggaagaacttgatggctat
ctgattgaacgccaggtgcgcaacgtgactctgatggtgtgggccaacaggcacttgcac
ctgatcgcacagaagctgtacctcagcaacgaggaggatgtccaccagatgcacagcttg
ctggcggagtacttcctaggggcatgggctggaggcaggaagaagattttccattgcgac
aacaatcactttgcccacttttcccaccacaagaacccacagcagccccacaatcacccc
caccaaccatcacaacatggccatgacaaaggcagtgccgaaaagcactcctacgacagg
cagactcctgaacagccctgggtgttccagtgcaacctcttggaaccagacatcttcttt
gtcaaccacaggaagatgacagaactggtataccacttgactcggagtgggcgcactgat
gatctaatgtatggggtcatcatgaatttcagctggctctacaccatgatcaaaatagga
cattttgacaaggtgctgacagatattgacctagcttacagttactcgcaggaaaaagag
ctgaaatttttggccacaacactgcgcagcatcaaggtcaaggtgacacggaacccggcg
tccttgtccgcagagcttcaacagaggctgcttcctgtggtgacttccctacccaagcta
cggcacctcctgctggagtgtgataaggacggccccaaatactgctccatcgttcccctt
cactcgtccatggatgtcacctatagtcccgagaggctgcctctctgctccagctacatg
cagattgtggaagtcctcccaacgctggcccccaacattgtcattgtggccttggaggac
ggctctgtcagcacgtgggatgtggagagcagacagctcctccgacagatcgacacagcg
cgttccgtcgtgcttggtatacgcctcaccaccgatgagaagtacctggtggtggcgacc
actaagaacactctgctgatatacgataatcacaagtcctgcctgctctcggaggtggag
gtgaagtgctccaagcactgtggcgtcaccggaggggttgccttcatcaatgggtttaca
ttatccagccagcatgccctggcatggctggaggccagcaaggaggtgaatgtcattgac
ttggtgtacggttggccattataccagttccactgctggtatgaggtcacgtgtgtgcag
tgctcccctgacggcatgtatgctttctgtgggcaatacctcaacaccacgaccatcttc
cacttgggcagtggggacaagctggcaaccatgacatcagagttttcgggtggtttcgtg
aagtccatcttggtgctagacacccttaaccagatggtgatgatcgacaatgaagggagt
ctgtcagtgtggaacacaaaagaagtcacaaacccccggctcatggaggactatgattgc
aggggggacgacagtgaagttgtcggaattgagctttctgaggaccaacgctccattctc
atctgcaaagccatgagcattgaagttctggataccaaagtctggaagatggttgagaag
ttcaaagctaagcgcactgagcgatttgtggctgcagtcctctccaaaaatggccagagt
attgttgcgtccatggaaaacacttcatccatttttgtgtggaggagggacagtggccag
tgtatggctagtctaattgagatatctggagccattgtgaaattaatcaagtccacccat
cataacctgctactctctgtagccagcagtggtgtgctgtcagtttgggacattgacata
atcacggccatgtcaaacatcgacaagacagggaaacgcatacaaatcctgcagcttaca
ggtcgagaagactttgtcttcaccatggacggctcagagtccatccacaagtggaacttc
agcacgggcttcattgagatggttttcaaacacgaaggccttgtggagaactgtgtcctt
accacctctggtgaccttatggtgacgtctgatgacaagtccagccagtacatctggcaa
acagccacgggggagaacatcttccgcattaatgggcagaagataacacaacttctcatc
acccataatgaccagtttgtggtctctctctgtgagcagaatgcctcgcgcgtctggagg
ttggccactgggcacaaggtgtgcaacatcctggtcaccctccagcacgcgctcatcacc
accgccaacaccttcctggtaggctccaccaaaaacaagctcctcgccgtcagtctttgg
tcaggaagtgtgtccaagaagttcatctgtgatgacgggattactattgtcaacttcaag
ctcatccctgactgcccagactatgtggtcttcatcacgtccactgagactgtgtttatc
tggagtgtggcagatgagtctgtctgccggcgcgtgcagatgccagccaacttcctgaag
aacctggaagatttccagatctcgcccaatggcaagctcgggattgtctccaagggtgat
gagaacatcaacgtcttggacctccacagtgggaagcttcgattggtccatgccgctgga
gtcatctggcgtcagaagctctcaagggatggccggtaccttgtgtacatctgcttccgc
agctgcgaggaagatgacgaggcgggcgtggtgtccaacctgattgtcatgcgtctggcc
gatggcaagagcatcggcacctgttccctctacaagacgcccaccttcctgtgcctctct
cagcgcgcgctcaacatcatcgtgggcttcgaggacggcagcatcggcacctacactgtg
gtggaccgggtcgacgcagccctcaagatcaaaattgccacttccaacagccggcagatc
gtcaacaacgctacgcaaaaggtccgacccaaatgcagcacccatgccttcaagactgta
gcggactgcatatggagggagtccacagaggtcttctccagggatagcccaatcaatctg
tccgactcgggcgaggctgagaccaccacgccaaccaagaagagtgaactgcttcagtga
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integrated database retrieval system
