Clupea harengus (Atlantic herring): 105907252
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Entry
105907252 CDS
T09045
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b
KO
K06091
MAGUK p55 subfamily member 5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04519
Cadherin signaling
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
105907252 (pals1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105907252 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105907252 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
PDZ domain-containing proteins
MAGUK family proteins
105907252 (pals1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
L27
SH3_2
PDZ_6
SH3_1
PDZ_2
SH3_9
ZNHIT3_C
DUF7071
Motif
Other DBs
NCBI-GeneID:
105907252
NCBI-ProteinID:
XP_031437409
Ensembl:
ENSCHAG00000011960
UniProt:
A0A6P8GDY2
LinkDB
All DBs
Position
15
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AA seq
677 aa
AA seq
DB search
MITSHINGYIMDDSKTGSVVAACNKAGTNHGAAEWDAMVDDTPTPTEPSRCSAQMRRIQH
HQEELRKKREEDGRLRQGQTSINSSLRLKKLSQDPCPKEGIDNPTFEPAYDGEDAGLEDC
PRDNTHLAELDDLLMSLHQVNHCLGTDEQTQEDLQLVMQLLQTSDFQTAFQLHCTIALGM
QRISPPFPLTAQAQGLCQEVENIIQSSRHKEGQELKDLLTSPHLHALMEAHDSVAEQELD
PEPSQTTLTQYGDTVKLVRLQKSIDVPLGATVRNEQQRVVVSRVVKGGAVERSGLLREED
EILEINGIPVRGKSINEVQEMMFTLKGTLTLLLIPSSLDIQLNRQNVMHVRAYFDYDPTE
DPYLPCRELGLSFQRGDILHIISQDDPNWWQAYRDGEEDNQPLAGLIPGKTFQQQRETLK
KIITDKNPENAGKIWCAKSKDKNKKPRKRNVRKPDRNTERHIEDILTYEEMALYHQPANR
KRPIALIGPPNKRQDDLKRRLLGAEPDRFASAVPHTTRTPRSHEVNGREYNFVSRLDFET
DLSTGKFLESGEFEKILYGTTSDSVRQVVNSGRICLLCLQTKSLRVLRASNLKPYVIFIA
PPSLERLRTLLSSDGSASKAEDLKDVVEKAREMEQNFAHLFDAIVIHDDQERAYQELKRL
IDKLDTEPQWVPSSWLC
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcacatattaatggctatatcatggacgactccaaaaccggatccgtggtc
gcagcatgtaacaaagcgggaaccaatcacggggcggcggagtgggacgccatggtagac
gacacgcccacccccaccgagccctctcgttgctctgcccagatgaggcgcatccagcac
caccaggaggagctgaggaagaagcgggaggaggacggccgtctgcggcaaggccagacc
agcatcaactcctcgctacggctcaagaagctgtcccaggacccctgcccaaaggagggc
atcgacaaccccacgttcgagcctgcctatgatggtgaagatgctggattggaggactgc
ccccgtgataacactcatctcgcagagctggacgacctgctgatgtccctgcatcaggtg
aaccactgcctgggcacggacgagcagacccaggaagacctgcagctagtcatgcagctg
ctgcagacctcggacttccagacggccttccagctgcactgcaccatcgccctgggcatg
cagcgcatcagcccccccttccccctcaccgcccaggcgcaggggctctgccaggaggtg
gagaacatcatccagtccagtcggcataaggagggtcaggagctgaaggacctgctcacc
tcaccccaccttcacgctctgatggaggctcatgatagtgtggcggagcaggaactggac
cctgagcccagtcaaaccaccctgactcagtatggagacactgtcaaactcgtacggcta
cagaagtctattgacgtccccctgggtgcaacggtgcgtaatgagcagcagcgtgtggtg
gtgagccgcgtggtgaaagggggagcggtggagcgtagcgggctgctgagggaggaggac
gagatcctggagatcaacggcatcccagtcaggggcaagagcatcaacgaggtgcaggaa
atgatgttcaccttgaagggcactctcaccctcctgctcatcccctcctccctcgacata
caattaaaccggcaaaatgtgatgcatgtgagggcttactttgactacgaccccacagag
gacccataccttccgtgccgggagctgggcctgtccttccagcggggggacatcctacac
atcatcagccaagacgaccccaactggtggcaagcctaccgggatggggaggaggacaac
cagcccctcgctggcctcatccctggaaagacctttcagcaacagagggaaactctgaag
aagatcataacagacaagaacccagaaaacgcaggaaagatctggtgcgccaagagcaag
gacaagaacaagaaaccgagaaagaggaatgtgcgcaaacccgacagaaacacagagcgc
cacattgaagatattttgacttatgaggagatggctctataccaccagccagccaatcgc
aagcggcccatcgctctgataggcccgcccaacaagcggcaggacgacctgaagaggagg
ctactgggcgccgagccggaccggttcgccagcgctgtgccacacaccacccgcaccccc
cgctctcatgaggtgaatgggcgcgagtacaactttgtgtcgcggctggacttcgagacg
gacctgtctaccggaaagttcctggagtcgggcgagttcgagaagatcctttacgggacc
acctccgactctgtcagacaggtggtcaactcaggacgcatctgcctgctctgtctgcag
accaagtctctgcgagtgctgcgcgcctccaacctgaagccctatgtcatcttcatcgcg
ccaccctccctggagagattgcgcaccctgctgtccagtgatggaagtgcatccaaggcc
gaggatctgaaggacgtggtggagaaggcccgtgagatggagcaaaactttgcccacctg
ttcgacgccatcgtaatccacgacgaccaggaacgggcctaccaggagctgaagcgcctc
atagacaaactggacacagagccccagtgggtgccctcctcgtggctctgctga
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