Clupea harengus (Atlantic herring): 105907283
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Entry
105907283 CDS
T09045
Symbol
pum2
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
char
Clupea harengus (Atlantic herring)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Rad26-like_N
Motif
Other DBs
NCBI-GeneID:
105907283
NCBI-ProteinID:
XP_031437006
Ensembl:
ENSCHAG00000015671
UniProt:
A0A6P8GCU0
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Position
15:18519063..18556022
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AA seq
1253 aa
AA seq
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MSVPCSILGMNDVAWQETRGGMLHTNGAPETVGVRVHSGASLAAVSVQGPGGTHPLQGMD
RGTNPTPGTPQPPLSGRSQDDATVGYFFQRQPGEQLGGCTTSKHRWPTGDGNHVDQVRAQ
DEMNYDFQALALESRGMGELLPAKKLWESDELPKDGRKGMLLGEEWRENAWGSSHHSVSQ
PIMVQRRPGQGFHGNGDANSVLSPRSEGGGLGVSMVEYVLSSSPGDKMDGRYRNGGFGGG
DGDPDGREKGDPIDKTSPFEEDKSAEMKVGEEGDSKSNGRGLLNGMDRDCKDFNPTPGSR
QASPTEAVERMGPSQSGLEMMSQHHALQAAAAAAQAAANAAAAAAAAAAYKPPQQQEDVQ
GQEQQGLGGMEQQGGVEALQFDYAGNQIQVDSSGTPVGLFDYNSGQQLFQRSNHLTVQQL
TAAQQQQYALAAAQQSHLGLAPAFVPNPYIINAPPGADPYTAAGLAAAATLAGPTVVPPQ
YYGVPWGVYPANLFQQQAAAAANHNANQQANNQGQPGQQQTDTDVGWGWRQPAAICVFNK
VMRAGNNQRPLTPGQGGQSQQESLAAAAAANPALAFASMPGYQVLAPAAYYDQNGALVMG
PGVGRSGQVRLVQTPLLINPAAAQAAAAASASGSGNNMSGPGNGLYRSMGCQQPQQQQQQ
QQQQQQQQQQLPPSSGLPSSSFYGSGTPTSQSSSLFSHTSPAQQQQPPPSSSLGFSGTGG
SLGVGLGSALGGFGSSVGSSSNSSVSRRDSLLPSSDLYKRGGGSSLTPIGQPFYNSLGYS
SSPSPIGLTPGHSPLTPPPSLPSSHGSSSSLPLGGLTNGSGRYISAAPGAEAKYRSTGGS
ASSLFSSSSQLFPPSSRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQD
QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT
RIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKC
IECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLG
QKYQGVSLEMTHKTYHTGSSDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALS
QHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAE
PAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSDLGPIGGPTNGLM
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttccatgcagcatcctaggtatgaatgacgttgcctggcaggagacaagaggc
gggatgctgcacacaaatggtgcccctgagactgtaggggtgagggtacacagcggtgcc
tccttggccgccgtcagcgtccagggccctggcggcacacaccctctgcagggcatggac
agagggaccaaccccactccgggcacaccacagccaccccttagcggccgctcccaggac
gacgccaccgtcgggtacttcttccagaggcagcctggggaacagcttgggggctgcacc
acgagcaaacaccgctggcccactggggatggcaaccatgtcgatcaggtgcgtgctcag
gatgagatgaactacgatttccaggccctggctctagagtctcgtgggatgggcgagctg
ctgccagctaaaaagctgtgggaatcggacgagctgcccaaagatggaaggaaagggatg
ctcctgggagaagagtggagagagaacgcttggggatcctcccaccactccgtatcacag
cccatcatggtgcagaggcgacctggccagggtttccacgggaacggtgatgccaactcg
gtgctgtccccgcgctcggagggcggcggcctgggtgtcagcatggtggagtacgtgctc
agctcctcccccggtgacaagatggacggacgctaccgcaacggaggcttcggcggagga
gacggggacccggacggccgagagaagggtgaccccatagacaaaacatccccgtttgag
gaagacaagagtgctgagatgaaagtgggcgaggagggcgactccaagtccaacgggaga
ggcctactcaacggcatggaccgcgactgcaaagacttcaaccccacccctggtagccga
caggcctcccccaccgaggccgtggagcgcatgggcccgagccagagcgggctggagatg
atgagccagcaccatgcgctgcaggccgcggccgcagccgctcaggccgccgccaacgct
gcagcagccgcggccgctgccgcagcctacaagcccccccagcaacaagaggacgtccag
ggccaggagcaacaggggctgggcggcatggagcagcagggcggcgtggaggcgctgcag
ttcgactatgccggcaaccagatccaggtggactcctccggcacccccgtgggcctgttc
gactacaactcgggccagcagctgttccagagatccaaccacctgactgtccagcagctg
accgcagcccagcagcagcagtacgccctggccgctgctcaacaatcacacctcggcctt
gctccagcgttcgtgccaaacccttacatcattaatgctccgcctggtgctgatccctac
accgctgctggcctggccgcagctgccacactcgcaggtcctacagtcgtgccgccacag
tactatggagttccatggggtgtgtacccagccaaccttttccaacaacaggctgcagca
gctgccaatcacaatgctaaccaacaggctaacaatcaaggacagcctggacagcaacag
actgatactgatgtggggtgggggtggcggcagccagcagcaatctgtgtgtttaataag
gtgatgcgtgcaggaaacaaccagcgccctctgaccccaggccaaggtgggcagagccag
caggagtctctggcagccgcggcggcggccaatcctgccctggccttcgccagcatgcca
ggctaccaggttctggctccagcagcctactacgaccagaacggggcgctggtgatgggt
cctggagtgggccggagtggacaggtccggctggtgcagacccccctcctgatcaacccg
gccgctgctcaggccgccgcagcggcgtccgcctctggctccggcaacaacatgtcaggc
ccgggcaacggcctgtaccgctccatgggctgccagcagccccagcaacagcagcagcaa
cagcagcagcagcagcagcagcaacaacagctgcccccctccagcggcctgccctccagc
tccttctacggctccggcacgcccacctcccagagcagctcgctcttctcccacacctcg
cccgcgcagcagcagcagcccccgcccagctcctcgctgggcttcagcggcaccgggggt
tcgctgggggtgggcctgggctcagcgctgggcgggttcggatcctcagtgggcagctct
agcaacagcagcgtgtctcgccgcgactccctgctgcccagctctgacctctacaagcgc
ggcggcggcagcagcctgacccccattggccagcccttctacaacagccttggctactcc
tcctcacccagccccatcggcctgaccccgggacactccccgctcaccccgccaccctcc
ctgccgtcctcccacgggtcctcctccagcctccccctgggtggtctgaccaacggcagc
gggcgttacatttccgcggccccgggggcggaggccaagtaccgcagcacgggcggcagt
gcctccagcctcttcagctccagcagtcagctgttcccgccctcgtcgcggccgcgctac
agccgctcggacgtcatgccgtccggccgcagccgcctgctcgaggacttccgcaacaac
cgtttccccaaccttcagctgcgcgacctgcccggccacatggtggagttctcccaggac
cagcacggctccaggtttatccagcagaagctggagcgcgccaccccagcggagaggcag
atggtgttcggtgagatcctgcaggccgcctaccagctcatgactgacgtctttgggaac
tacgtcatccagaagttctttgagtttggcagtgcggatcagaagctcgcgctggcgacg
cgtatccgtgggcacgtgctgccccttgccctgcagatgtatggctgccgcgtcatccag
aaggccctggaatccatctcctccgaccagcaggtaattagtgacattgtgcgagagctg
gatggccacgtgctcaagtgtgtgaaagaccagaacggaaaccatgtggtgcagaagtgc
atcgagtgtgtgcagccccaagctctgcagttcattattgacgccttccagggacaggtt
tttgtgctgtccacccacccgtatggctgcagggtgatccagcgcattctggagcactgc
acccaggagcagaccctgcccatcctggaggagctgcaccagcactctgagcagctgggc
cagaagtatcaaggcgtttcattggagatgacacacaaaacatatcatacagggtccagc
gatgcgctcttcaaggatcagtatgggaactacgtcatccagcatgtcctggagcacggt
cgccccgaggacaagagcaagatcgtggcggaggtgcggggcaaggtcctggccttgagc
cagcataagtttgccagtaatgtggtggagaagtgcgtcatccactcctcccgcgctgag
agggcgctgttgatcgatgaggtgtgttgccagaaggacggtccgcacagcgcgctctat
accatgatgaaggaccagtacgccaactatgtggtgcagaggatgatcgatatggccgag
cctgcccagcgcaaaatcatcatgcataagatccggccacatattgctaccctccgtaag
tacacctacggtaagcacatcctggccaagctggagaagtactacatgaagagtggctcg
gacctgggaccgattgggggccccaccaatggcttgatgtag
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integrated database retrieval system