KEGG   Clupea harengus (Atlantic herring): 105907283
Entry
105907283         CDS       T09045                                 
Symbol
pum2
Name
(RefSeq) pumilio homolog 2 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
char  Clupea harengus (Atlantic herring)
SSDB
Motif
Pfam: PUF PUF_NOP9 Rad26-like_N
Other DBs
NCBI-GeneID: 105907283
NCBI-ProteinID: XP_031437006
Ensembl: ENSCHAG00000015671
UniProt: A0A6P8GCU0
LinkDB
Position
15:18519063..18556022
AA seq 1253 aa
MSVPCSILGMNDVAWQETRGGMLHTNGAPETVGVRVHSGASLAAVSVQGPGGTHPLQGMD
RGTNPTPGTPQPPLSGRSQDDATVGYFFQRQPGEQLGGCTTSKHRWPTGDGNHVDQVRAQ
DEMNYDFQALALESRGMGELLPAKKLWESDELPKDGRKGMLLGEEWRENAWGSSHHSVSQ
PIMVQRRPGQGFHGNGDANSVLSPRSEGGGLGVSMVEYVLSSSPGDKMDGRYRNGGFGGG
DGDPDGREKGDPIDKTSPFEEDKSAEMKVGEEGDSKSNGRGLLNGMDRDCKDFNPTPGSR
QASPTEAVERMGPSQSGLEMMSQHHALQAAAAAAQAAANAAAAAAAAAAYKPPQQQEDVQ
GQEQQGLGGMEQQGGVEALQFDYAGNQIQVDSSGTPVGLFDYNSGQQLFQRSNHLTVQQL
TAAQQQQYALAAAQQSHLGLAPAFVPNPYIINAPPGADPYTAAGLAAAATLAGPTVVPPQ
YYGVPWGVYPANLFQQQAAAAANHNANQQANNQGQPGQQQTDTDVGWGWRQPAAICVFNK
VMRAGNNQRPLTPGQGGQSQQESLAAAAAANPALAFASMPGYQVLAPAAYYDQNGALVMG
PGVGRSGQVRLVQTPLLINPAAAQAAAAASASGSGNNMSGPGNGLYRSMGCQQPQQQQQQ
QQQQQQQQQQLPPSSGLPSSSFYGSGTPTSQSSSLFSHTSPAQQQQPPPSSSLGFSGTGG
SLGVGLGSALGGFGSSVGSSSNSSVSRRDSLLPSSDLYKRGGGSSLTPIGQPFYNSLGYS
SSPSPIGLTPGHSPLTPPPSLPSSHGSSSSLPLGGLTNGSGRYISAAPGAEAKYRSTGGS
ASSLFSSSSQLFPPSSRPRYSRSDVMPSGRSRLLEDFRNNRFPNLQLRDLPGHMVEFSQD
QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT
RIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKC
IECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLG
QKYQGVSLEMTHKTYHTGSSDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALS
QHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAE
PAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSDLGPIGGPTNGLM
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgagcgttccatgcagcatcctaggtatgaatgacgttgcctggcaggagacaagaggc
gggatgctgcacacaaatggtgcccctgagactgtaggggtgagggtacacagcggtgcc
tccttggccgccgtcagcgtccagggccctggcggcacacaccctctgcagggcatggac
agagggaccaaccccactccgggcacaccacagccaccccttagcggccgctcccaggac
gacgccaccgtcgggtacttcttccagaggcagcctggggaacagcttgggggctgcacc
acgagcaaacaccgctggcccactggggatggcaaccatgtcgatcaggtgcgtgctcag
gatgagatgaactacgatttccaggccctggctctagagtctcgtgggatgggcgagctg
ctgccagctaaaaagctgtgggaatcggacgagctgcccaaagatggaaggaaagggatg
ctcctgggagaagagtggagagagaacgcttggggatcctcccaccactccgtatcacag
cccatcatggtgcagaggcgacctggccagggtttccacgggaacggtgatgccaactcg
gtgctgtccccgcgctcggagggcggcggcctgggtgtcagcatggtggagtacgtgctc
agctcctcccccggtgacaagatggacggacgctaccgcaacggaggcttcggcggagga
gacggggacccggacggccgagagaagggtgaccccatagacaaaacatccccgtttgag
gaagacaagagtgctgagatgaaagtgggcgaggagggcgactccaagtccaacgggaga
ggcctactcaacggcatggaccgcgactgcaaagacttcaaccccacccctggtagccga
caggcctcccccaccgaggccgtggagcgcatgggcccgagccagagcgggctggagatg
atgagccagcaccatgcgctgcaggccgcggccgcagccgctcaggccgccgccaacgct
gcagcagccgcggccgctgccgcagcctacaagcccccccagcaacaagaggacgtccag
ggccaggagcaacaggggctgggcggcatggagcagcagggcggcgtggaggcgctgcag
ttcgactatgccggcaaccagatccaggtggactcctccggcacccccgtgggcctgttc
gactacaactcgggccagcagctgttccagagatccaaccacctgactgtccagcagctg
accgcagcccagcagcagcagtacgccctggccgctgctcaacaatcacacctcggcctt
gctccagcgttcgtgccaaacccttacatcattaatgctccgcctggtgctgatccctac
accgctgctggcctggccgcagctgccacactcgcaggtcctacagtcgtgccgccacag
tactatggagttccatggggtgtgtacccagccaaccttttccaacaacaggctgcagca
gctgccaatcacaatgctaaccaacaggctaacaatcaaggacagcctggacagcaacag
actgatactgatgtggggtgggggtggcggcagccagcagcaatctgtgtgtttaataag
gtgatgcgtgcaggaaacaaccagcgccctctgaccccaggccaaggtgggcagagccag
caggagtctctggcagccgcggcggcggccaatcctgccctggccttcgccagcatgcca
ggctaccaggttctggctccagcagcctactacgaccagaacggggcgctggtgatgggt
cctggagtgggccggagtggacaggtccggctggtgcagacccccctcctgatcaacccg
gccgctgctcaggccgccgcagcggcgtccgcctctggctccggcaacaacatgtcaggc
ccgggcaacggcctgtaccgctccatgggctgccagcagccccagcaacagcagcagcaa
cagcagcagcagcagcagcagcaacaacagctgcccccctccagcggcctgccctccagc
tccttctacggctccggcacgcccacctcccagagcagctcgctcttctcccacacctcg
cccgcgcagcagcagcagcccccgcccagctcctcgctgggcttcagcggcaccgggggt
tcgctgggggtgggcctgggctcagcgctgggcgggttcggatcctcagtgggcagctct
agcaacagcagcgtgtctcgccgcgactccctgctgcccagctctgacctctacaagcgc
ggcggcggcagcagcctgacccccattggccagcccttctacaacagccttggctactcc
tcctcacccagccccatcggcctgaccccgggacactccccgctcaccccgccaccctcc
ctgccgtcctcccacgggtcctcctccagcctccccctgggtggtctgaccaacggcagc
gggcgttacatttccgcggccccgggggcggaggccaagtaccgcagcacgggcggcagt
gcctccagcctcttcagctccagcagtcagctgttcccgccctcgtcgcggccgcgctac
agccgctcggacgtcatgccgtccggccgcagccgcctgctcgaggacttccgcaacaac
cgtttccccaaccttcagctgcgcgacctgcccggccacatggtggagttctcccaggac
cagcacggctccaggtttatccagcagaagctggagcgcgccaccccagcggagaggcag
atggtgttcggtgagatcctgcaggccgcctaccagctcatgactgacgtctttgggaac
tacgtcatccagaagttctttgagtttggcagtgcggatcagaagctcgcgctggcgacg
cgtatccgtgggcacgtgctgccccttgccctgcagatgtatggctgccgcgtcatccag
aaggccctggaatccatctcctccgaccagcaggtaattagtgacattgtgcgagagctg
gatggccacgtgctcaagtgtgtgaaagaccagaacggaaaccatgtggtgcagaagtgc
atcgagtgtgtgcagccccaagctctgcagttcattattgacgccttccagggacaggtt
tttgtgctgtccacccacccgtatggctgcagggtgatccagcgcattctggagcactgc
acccaggagcagaccctgcccatcctggaggagctgcaccagcactctgagcagctgggc
cagaagtatcaaggcgtttcattggagatgacacacaaaacatatcatacagggtccagc
gatgcgctcttcaaggatcagtatgggaactacgtcatccagcatgtcctggagcacggt
cgccccgaggacaagagcaagatcgtggcggaggtgcggggcaaggtcctggccttgagc
cagcataagtttgccagtaatgtggtggagaagtgcgtcatccactcctcccgcgctgag
agggcgctgttgatcgatgaggtgtgttgccagaaggacggtccgcacagcgcgctctat
accatgatgaaggaccagtacgccaactatgtggtgcagaggatgatcgatatggccgag
cctgcccagcgcaaaatcatcatgcataagatccggccacatattgctaccctccgtaag
tacacctacggtaagcacatcctggccaagctggagaagtactacatgaagagtggctcg
gacctgggaccgattgggggccccaccaatggcttgatgtag

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