KEGG   Clupea harengus (Atlantic herring): 105907308
Entry
105907308         CDS       T09045                                 
Symbol
riox1
Name
(RefSeq) ribosomal oxygenase 1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:char03009]
    105907308 (riox1)
   03036 Chromosome and associated proteins [BR:char03036]
    105907308 (riox1)
Enzymes [BR:char01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     105907308 (riox1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     105907308 (riox1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     105907308 (riox1)
Ribosome biogenesis [BR:char03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    105907308 (riox1)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    105907308 (riox1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_1
Other DBs
NCBI-GeneID: 105907308
NCBI-ProteinID: XP_012691064
Ensembl: ENSCHAG00000002553
UniProt: A0A6P3W6P2
LinkDB
Position
15:17704189..17710159
AA seq 543 aa
MERKHVSAFALYQSAVTPSNPSNEVLPVKKKKRKLQNGLPIVKSKKIRKTTAAVRNSLQT
KKKEKQEKSLNDEEQQPREMAGDTPSLNTFLDSLVKVNNSRERASRLFQWFIHPIPSKNF
FRDNWEKKPLLIKRQERDYYKGLFSTAEFDRILRDDDVQFGVNLDVTSYINGKRDTHNPP
GRALPYTVWDFYESGCSLRMLNPQAFNSTVWNVLSILQELFGSMVGANMYLTPAGTQGFA
PHYDDIEAFVVQLEGKKHWRVYNPRSDDEVLPVVSSPNFSQAEIGKPMLDVVLEAGDLLY
FPRGFIHQGDCLPDTHSLHITISSFQKNSWGDLLTKLVPAALEIAMEEDVEFRKGLPLDY
LSYMGVQNSDKEDPHRAEFLSHAGSLMKKLVSYAPVDAAVDQKAREFLYDCLPPALTPAE
KASSVYGAPARWEDGEALGLANHVRPQTRIRLIRAGIARLCSDGEEVSLYHTMENSRVYH
KEELKFFEIKPEHTDAMEFLLHSYPKFVTVSSLPCDTTEEKLSLADLLFEKGLIHTAESL
KSE
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggagagaaaacatgtgtccgcttttgcattgtatcaatcagcagtaaccccttcgaac
ccctcaaatgaggttttgccagttaagaaaaagaagaggaagttgcagaatgggcttcca
atcgtgaaatctaagaagattagaaagacgactgctgcagtacgaaacagtttgcaaaca
aagaagaaagaaaagcaagagaagagcctgaatgatgaagaacagcaacccagagaaatg
gcaggcgacacgccatccttaaatacttttctggacagcctcgtcaaagtcaacaatagc
agagaaagggcaagcaggctgtttcagtggtttatccatcctataccttccaagaacttt
tttagggataattgggagaaaaagccattgctgatcaaacgccaggaacgagattactac
aaaggacttttctccacggcagaatttgacagaattctgagagatgatgatgtccagttt
ggggtgaacctggatgtcaccagttacattaacggcaaacgagacacacacaaccctccg
ggaagggctctgccctacacagtatgggatttctatgagagcggctgctccctcaggatg
ctgaacccccaggcattcaactccacggtctggaatgttctctccatcctgcaggagctc
ttcggcagcatggtcggcgccaacatgtatctgacgccggcaggcacgcagggcttcgct
ccccactacgatgacattgaggcctttgtggtccagctggagggcaagaagcactggaga
gtgtacaaccctcggtctgacgatgaggtgcttccagtggtatcaagtcccaacttcagc
caggctgagatcgggaagcccatgcttgatgtggtgctagaggcaggagacctgctctac
ttcccccgggggttcatccaccagggtgactgtctgccagatacccattccctccacatc
accatctcctccttccagaagaacagctggggtgacctgctcaccaagcttgttccagca
gctctggagatcgcaatggaggaggatgtggaatttcgtaaaggtcttcccctggactat
ttatcgtacatgggggttcagaattctgataaggaggatccccatcgagcagagttcctg
agtcacgctggctctctgatgaagaagctagtgagttacgcccctgtggacgctgctgtc
gatcagaaggccagagagtttctgtatgactgcttacctcctgcgctcactccagcggag
aaggccagcagtgtttacggtgccccggcacgctgggaggatggcgaggcgttgggcttg
gccaatcacgtgaggcctcagaccaggatccgcctcatacgcgcaggaatagcaaggtta
tgcagtgatggagaagaggtctcactttatcacacaatggaaaactcccgtgtttaccac
aaagaggagctcaagttctttgaaataaaaccagagcacacagatgccatggagttcctg
cttcactcatatcccaagtttgtcaccgtttctagtttaccatgtgatacaacagaggaa
aagctgtccctggcagacctgctgtttgagaagggattgatccacactgcagaatctctg
aagtcagagtga

DBGET integrated database retrieval system