Clupea harengus (Atlantic herring): 105907309
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Entry
105907309 CDS
T09045
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b isoform X1
KO
K12822
RNA-binding protein 25
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105907309 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105907309 (rbm25b)
Spliceosome [BR:
char03041
]
Complex A
U1 snRNP components
U1 related factors
105907309 (rbm25b)
Complex B
105907309 (rbm25b)
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GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
105907309
NCBI-ProteinID:
XP_031437669
Ensembl:
ENSCHAG00000012039
UniProt:
A0A6P8GES3
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Position
15:complement(18325256..18343482)
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AA seq
876 aa
AA seq
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MLVCNHKVTAYVAKPGVDLPSKMSFPPHLNRPQIGISPLPPGIPPPQFARFPQAVPAGTP
MIPVHMGIMTQTPTMLVPTSVSVVSKPAIHKKDLSVVRLKETEETGGPTTTVFVGTISEK
ASDMLIRQLLSKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIAEKKL
LVKVDAKTKAQLDEWKAKKKSSNGMSKTDDTGEDEEEELDEETKRRDQVVRGAIDGLMRE
YAKELTAPSQDEESLRRKKKKERKEEEDINTIDIEEDKRDLISREINKFRDTHKKLEEEK
GKREKERQELERDRKEREKERERERERWEREREKEREREREKEREREKDREKERERDRDR
ERDREHERERDWDKERSRDRSLDRSRSREQSRDREKKRDRGEDDEEAYERRKLERKLREK
EAAYQERLKNWEIRERKKGRDHAKEVERDDERRREMAKEGKRLKEFLEDYDDERDDPKYY
RGSALQKRLRDREKERELDERDRKREKEELEEIRQRLLAEGHPDPEAELRRMEEEAERLR
QPPPPPPPKLEVEEPRERERERERDRDRDRERNRERNQDWDRERDWDRERHERQERHDRH
DRHRGNGDAPAPPSDNDIEEGEEPDDEDGEDRGESRPCLKPTLRPITAAPSVSSASAGAT
PNTPGDESPCGIIIPHENSPPEAAPQEEHRPKIGLSLKLGSTGSPSQPNVVKRKKLQDSV
FNRFDDDEADEGPKKRKLVPLDYDDDKSQGLDGLGLGGGKGADMEEKRQHIKSLIEKIPT
GKPELFNYPLDWSAVDPSLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMANSTPQGI
LDDVAMVLDEEAEVFVVKMWRLLIYETEAKKIGLVK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgtgcaatcacaaagtaactgcgtacgtagctaaaccaggtgtggaccttcct
tctaaaatgtccttccccccacacctcaaccggccacagatcggcatttccccactccct
cctggcattccaccaccacaatttgctcggttccctcaagcagtgcccgctgggacccca
atgataccagtgcacatgggcatcatgacacaaacccctacaatgctggtgcccacctcg
gtgtctgtggtcagtaagcctgctatccacaagaaggacctgtccgtggtgcgcctgaaa
gagactgaggagacgggcggcccgaccaccacagtgtttgtgggaaccatctcagagaag
gcctcagatatgctcatcagacagctcctatcaaaatgtggtctggtccttagctggaaa
agagtgcagggagcgtctgggaaacttcaagcctttggcttctgtgagtataaggagcca
gagtccacgctcagggccctgcggctcctgcacgacctgcagattgcagagaagaagctg
ttggtgaaggtggacgccaagaccaaagctcagctggacgagtggaaggccaagaagaag
agctccaacgggatgtccaagactgacgacaccggagaagacgaagaggaggagctggat
gaggaaaccaagcgacgggatcaggtggtcaggggagccattgacggcctcatgcgggag
tacgccaaagagctcactgctccatcgcaagacgaagagtctcttcggcgcaagaaaaag
aaagagaggaaagaagaggaggacatcaacaccattgacatagaggaagacaagagagac
ctgatttccagggagatcaacaaattccgcgacacacacaagaaactcgaggaggagaaa
ggcaagcgggagaaggagcgtcaggagctcgagcgcgataggaaggagagggagaaggag
agagagcgtgaacgcgagcgctgggagcgggagcgagagaaggagagagagcgcgagcgc
gagaaggagagagaacgcgagaaggaccgggagaaagagagggagcgcgaccgtgataga
gagcgcgaccgggagcatgagagagaacgagactgggacaaggagaggagccgagaccgg
agcctcgatcgcagcaggtccagagaacagagccgcgaccgggagaagaagcgagaccgt
ggggaagatgatgaagaggcgtacgagcgccgcaagctggagaggaagctcagggagaag
gaggctgcctatcaggagcggctgaagaactgggagattagggagcggaagaagggccgt
gatcacgccaaggaggtggagagggacgatgagcgccgacgggaaatggcgaaagaaggc
aaaaggttgaaggaattcctggaggactatgatgatgaaagagatgaccccaagtactac
aggggcagtgctctgcagaagcgtctgcgtgaccgggagaaggagagggaattggacgaa
cgagacaggaagagagagaaggaggagctggaggagatcagacagagactgctggcagag
ggacatccagaccccgaagcagaactgcgcaggatggaggaggaggcggagcgtctgcgt
cagccaccgcccccgcccccgcccaaactagaggtcgaggagccacgggagcgtgaacgt
gagcgtgaacgggaccgggaccgggaccgagaacggaaccgagaacggaaccaggactgg
gatcgagagcgtgactgggacagggagcgacacgaacgccaggaacgtcacgatcgccac
gaccgtcacagaggaaatggagacgcccccgcacccccatccgacaatgacatcgaggaa
ggggaggagccagacgacgaggacggagaagacaggggcgagtccaggccctgcctgaag
cccacgctccggccaatcacggcggctccgtctgtgtcgtcggccagtgcgggggccaca
cccaacacacccggggacgagtcgccctgcggtatcataatcccgcatgaaaactcgccc
cctgaggccgcccctcaggaggagcaccggcccaagattggtctcagcctcaaattaggc
tctactggcagccccagtcagcccaacgtggtcaagcgcaagaaacttcaggacagcgtc
ttcaaccgcttcgacgacgatgaggccgacgagggcccgaagaagaggaagctggtgcca
ctcgactacgacgacgacaagagccaagggctggacggcctcgggctgggtgggggcaag
ggagctgacatggaggagaagcgccagcacatcaagagcctgatcgagaagatccccacg
ggcaagcctgagcttttcaactacccgctcgactggtccgcagtagacccgtctttgatg
gagagacgcattcggccatggatcaacaaaaaaatcattgagtacatcggcgaggaagag
gctacgctcgtggacttcgtgtgctccaaggtgatggcaaacagcacaccacaaggcatc
ctggatgatgttgccatggtgctggatgaagaggccgaggtgttcgtcgtgaaaatgtgg
cggttattaatctacgagaccgaagccaagaagatcggactggtgaaatag
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