Clupea harengus (Atlantic herring): 105907333 Help Entry 105907333         CDS       T09045                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism char  Clupea harengus (Atlantic herring) Pathway char03040   Spliceosome Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105907333 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:char03041]     105907333 (cdc40) Spliceosome [BR:char03041]  Complex C   Other components    Step II factors     105907333 (cdc40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP WD_LRWD1 Beta-prop_Vps41 DUF6576 Motif Other DBs NCBI-GeneID:  105907333 NCBI-ProteinID:  XP_012691097 Ensembl:  ENSCHAG00000022664 UniProt:  A0A6P3W6R4 LinkDB All DBs Position 15:16533398..16549189 Genome browser AA seq 578 aa AA seqDB search MAAAVGSLVSYDSNSDSDNETESTPAPQKIDPDAFAHMQPLKSRKTTSLVVLNSAPEVAV KEDVETGIHLDPSLKEVNYNPSFETMFAPEFGPVNPFKTQQMAAPRNMLSGYAEPAHVND FMFEQQRRTFSTFGYALDPSVDTTEVSISNYIGAVDEAEKNKGQTVFETGPKKSVKRTKV KGGDASDLDGFLGPWAKYQDEKDGAKPSEEEQKELDEILAKRQKKGRNEEEAPGEEKTIL HVKEMFDYQGRSYLHAPQDVGINLRSPEAPEKCYLPKKQLHVWTGHTKGVSAIRLFPASA HLLLSASMDCKIKLWEVYGDRKCLRTFIGHSKAVRDVCFNNTGSQFLSAAYDRYLKLWDT ETGQCISRFTNRKVPYCVKFNPDEDKQTLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK LYHRIKAHDKVCISALWHPHETSKVITCGWDGLIKLWD NT seq 1737 nt NT seq  +upstreamnt  +downstreamnt atggcggccgcggtgggttccctcgtttcgtatgattccaattcagactctgataatgag acagaatctacaccagcgccacaaaaaatagatccagatgcgtttgcacacatgcagcct ctgaaatctaggaaaacgacgtctttggttgttcttaactctgctcctgaagtcgccgtg aaggaggatgtcgagactggcattcatctggacccctctctcaaagaagtcaactacaac ccctcatttgaaactatgttcgcgccagagtttggtccggttaacccattcaagacgcaa caaatggcggctcccaggaacatgctgtcgggatacgcagagccagcgcatgtcaacgac ttcatgttcgagcaacagaggaggacgttttccacctttggttatgccttagacccttca gtggacactactgaggtgtccatcagcaattacatcggtgctgtggacgaggctgagaaa aacaaaggacagaccgtgtttgagacggggccgaagaagtcggtgaagaggacgaaggtg aagggaggagacgcgtcagacctggacgggtttctggggccgtgggccaagtaccaggat gagaaagatggggccaaaccctcagaggaggaacagaaagagctggatgagatcctcgca aaacgacagaagaagggaagaaatgaggaagaggctccaggggaggagaagactattctt catgttaaggagatgttcgactaccagggccgctcctacctgcacgcgcctcaggatgtg ggcattaacctgcgctcgccggaggcacctgagaagtgctacctgcccaagaaacagctg catgtatggactggacacacaaagggggtcagtgcgatccgtttgtttcctgcctctgct catctgctgctctccgcttccatggactgtaagatcaagttatgggaggtctacggcgat cgcaaatgcttacgaacatttattggtcacagtaaggcggtgcgtgatgtctgctttaat aacaccggctcccagttcctcagtgcagcctatgaccgctacctgaaactgtgggacaca gagaccggtcagtgtatatcacgcttcaccaacagaaaggttccctactgtgtgaagttc aacccagacgaggacaaacagaccctgtttgtggctggcatgtctgacaagaagattgtg cagtgggatatccgcagtggtgaggtggtgcaggagtacgacagacacctgggtgcggtc aacaccatcacgtttgtggacgaaaaccggcgcttcgtcagtacctcagacgacaagagt ctccgcgtgtgggagtgggatattcctgtggacttcaagtacatcgctgagcccagcatg cactctatgccagctgtcacactctcacccaatgggaagtggctagcttgccagtccatg gataaccagatcctgattttcggggctcaaaaccgcttcaggctcaacaagaagaagatc ttcaagggccacatggtagcggggtacgcctgtcaggtcgacttctcccctgatatgagt tatgtggtgtcgggtgacgcggatgggaagttgaacatctgggactggaagacgactaag ctgtaccaccgcatcaaggcccacgataaggtgtgcatcagcgccctctggcacccccac gagacctccaaagtcatcacctgcggctgggacggactgatcaaactctgggactag

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