Clupea harengus (Atlantic herring): 105907388
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Entry
105907388 CDS
T09045
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105907388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105907388
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105907388
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
105907388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
105907388
NCBI-ProteinID:
XP_031427169
UniProt:
A0A6P8FLS4
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Position
8:complement(6561343..6573073)
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AA seq
952 aa
AA seq
DB search
SDIRCGTGGCPRSSNQRPLYWRTSDRDPEGKRKCISGCEIKQSKESIVGTKGPANFQNRQ
IVQIACGDHHSVALTKDGQLFTWGQNSNGQLGLGKGESSTSSPRPLKSLVGIPLSQISAG
GDHSFALSLSGAVFGWGKNSAGQLGLGDDTDRLSPAPVVSLHQKKTVFISCGAEHTAVLT
KGGLVFTCGSGRYGQLGHNSLRDELRPRLVAEFWGSKVSQIACGRYHTLGFVESQSILYA
FGCGEQGQLGSGRTNNQTVPLPVDLPQEQNNDSTIKIIFAGANQSFAVSRSGENWVASHP
NCDQRKKACELDLEIADRWISSNPKHWTRTKRNITKIFSSVSCINGSFLKKSSDKHYSTS
QHQCGLDLSMTRQFFEKLSRKEKVLKEVESVVQQHLLPSLNHCPAGVEALRVYLILPELL
RVLLKQQLGTYLAVSLAEAILKLCPDLLKVLEGWWGSMGKTMMSKHIQVWKNALSFLLRA
GLLHHYNPGVKATLEVLKCLHRANRKAEMSKQVHFTDFYIKELSQNSIMLQTDVTLWRQI
KSSQLQEVELTPAIFCRFPFLLDLPSKVLIYQHDAQVTKVSHQLIHHQAFTGRVGPNVFP
GEVPTPVIKLNIRRTHLLEDTFRQLGATDHENFQKQLVVQFVDETKLTLVQAKDFFLHTF
DDLFAPDFGMFMYDDTKTLVWFPSKPKHETKTYFLFGILCGLALNNNNIVHLPFPQAMFK
KLLGVKVTLEDLTEFSSVLGESLRYILYDYTDDDIENLDMTYSITWDDTETELDPKEMGK
PVTSKNKKEFVQAYVNYALNKSVERVFEEFKRGFFKVCARDVVEMFHPEELRGMMVGRED
YDWDKLKQNTVYESGYHGNHPVIKIFWEVFDELSHDQKKAFLLFLTGCGRVPILGMDQIR
MTIRAWHESSQDHFPQSLTCHAILDLPMYQSKERLQTLLTEALNHNRGFWKE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
tcagacatccgatgtggtacaggtggctgtccccgcagcagcaatcagcgacctctctat
tggagaacgagtgaccgcgatcctgagggaaaacggaagtgcatcagtggctgtgagatt
aaacagtcaaaagagagcatcgtgggaacaaagggcccggcaaacttccaaaacagacaa
attgtacagattgcttgtggggaccatcactcagtagctcttaccaaagacggacagtta
ttcacatggggccagaactccaacggtcagctgggtctggggaagggggagtccagtacc
tcgtccccccgacccctcaagtctctggtggggatccccctgtctcagatcagtgctgga
ggagaccacagcttcgccctgtccctctcaggggccgtgtttggctggggcaaaaacagc
gctggccagctgggccttggagacgatacagacagactcagtcctgcccctgtagtctcc
cttcatcagaagaagactgttttcatttcctgtggagcagaacatactgctgtgttaacc
aagggtggtttagtgtttacatgtggatcaggacgctatggccagctggggcacaactct
ctccgagatgaactacgaccacgactggtggctgaattctgggggtcaaaggtgtctcag
atagcctgtgggagatatcacacattgggatttgttgagtcccaaagcatattgtatgca
tttggatgtggagagcaaggacagctcgggagtggccggacaaacaatcagactgttcct
ctacctgttgatctaccacaagagcaaaacaatgacagcaccattaagataatttttgca
ggggctaaccagtcgtttgctgttagcaggtctggagagaattgggttgccagtcatcct
aattgtgatcaaaggaagaaggcatgcgagttagatttagagatagcagacagatggatc
tctagcaacccaaaacattggacaaggacaaagaggaacatcacaaagattttctcatct
gtctcatgtatcaatgggagttttcttaaaaaaagctctgacaaacattactcgacttca
caacatcagtgcggtttggatttgtccatgactcgccagttttttgagaagctgtcacgg
aaagagaaggttctgaaagaggttgagagtgtggtgcagcagcatctgctcccctccctg
aaccactgccctgctggagtggaggccctcagggtttacctcatcctgcctgagctgctg
agggtgctgctcaaacagcagctggggacatatcttgctgtctcattggctgaggccatt
ctcaagctgtgtcctgatttgttgaaggttcttgagggctggtggggatccatgggaaaa
acaatgatgtccaagcacatccaggtgtggaaaaacgccctgtccttcctcctgagagcc
ggcctgttgcatcactacaaccctggtgtaaaggctactctcgaggtccttaagtgcctt
cacagagcaaacaggaaagctgagatgtctaagcaagttcatttcactgatttctacata
aaggaacttagccaaaactccatcatgcttcagacagatgtgacattgtggagacaaatt
aagtcgtcacaactgcaggaagtggaacttacacctgcgattttctgccgttttccattc
ctcttagatcttccgagcaaggtgctaatttaccaacatgatgctcaggttacaaaggta
tcccaccaactgatccatcaccaagcgttcactgggagggtaggtcctaacgtcttccct
ggggaggtccctactcctgtgatcaagctcaacattagacgcacccatctcctggaggat
acatttaggcaactgggtgccactgaccatgaaaacttccaaaaacagctggtggtccag
tttgttgacgagacaaaactgacacttgtgcaagcaaaggattttttccttcacacgttt
gatgacttgtttgcacctgactttggcatgttcatgtacgatgacaccaaaactcttgtc
tggttcccatctaagccaaaacatgaaaccaaaacgtacttcctctttggaatactttgt
ggtctagccttgaacaacaacaacattgtacacttgccgtttcctcaggctatgtttaag
aaacttctgggtgtcaaagtaacactggaagacctgactgagttcagttctgttcttgga
gagagcttgcggtacatcttgtacgactatactgatgatgacattgaaaatctagacatg
acctattcaattacctgggatgacactgaaacggagctggatccaaaagaaatgggaaaa
cctgtgacaagcaaaaacaagaaagagtttgtgcaggcctatgtgaactatgccttaaac
aaatcagtggagagggtgtttgaggagttcaagaggggcttcttcaaagtgtgtgccaga
gacgtggtggaaatgttccacccggaggagctgagggggatgatggtggggagggaggac
tacgactgggacaaactcaaacagaacacagtttatgagagcggataccatggaaaccac
cctgtgattaaaatattctgggaggtttttgacgagctttctcatgatcaaaagaaagcc
ttcctcttgttcctgactggctgtggtcgcgtgccgatcttgggcatggatcagattagg
atgaccatacgcgcctggcatgagtcatctcaggatcatttcccacaatccctcacatgt
catgccatcctggaccttcccatgtaccagtccaaagagagactccagactctgctcact
gaggctctgaaccacaacagaggcttctggaaagaatga
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