Clupea harengus (Atlantic herring): 105907456
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Entry
105907456 CDS
T09045
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105907456 (rnft1)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105907456 (rnft1)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105907456 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
Prok-RING_4
zf-ANAPC11
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_6
zf-RING_16
zf-RING_4
zf-Nse
SelP_N
Motif
Other DBs
NCBI-GeneID:
105907456
NCBI-ProteinID:
XP_031427591
Ensembl:
ENSCHAG00000023238
UniProt:
A0A6P8FVV3
LinkDB
All DBs
Position
8:complement(8197757..8201825)
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AA seq
423 aa
AA seq
DB search
MKQRSQYDRGNSYENRRALKLRESPIVMQTNSSEENTPSGNGLSLTLQPERLPRTPNTDG
SNTSEPDDVRVSMTGLSTGPSGRPASRRARAGSHSHSHSHGHSRPHSHHEPENESIDPDL
ESGEPSTSFSEFRYLFRWIQKSLPFIIILSAKLIIQHALGLAVGIGLFTTFLYVNKNIQT
QVFLQDRRSKLQCVWLLLFLTSSTLLLYYTFLSDALYYCLIFMSPSIEPLGFWEVLWAVG
VTNSVVKFIFMGLKCLILILPPSMAAYRTQGKWFMMTEEVGQVYQAVVPMPTWFRFLVTY
QEMDGRTGLTLGILLALGYLILKLLELYGQWGSLQKTTSIFFSNEHSGAAATKSQCADAG
DVCPICQAEYREPRVLLCQHIFCEECVALWLNQEKTCPLCRTVITDKVHKWKNGATSAYL
QIY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcggagtcagtatgacagaggaaattcttacgagaaccgaagagcgttgaaa
ctgagggaatctcccattgtaatgcagactaattcatcagaggaaaacactccctcagga
aatggcttatccctaacactgcaaccagagcgacttccgaggacacccaacacggatggt
tccaacacctcggaaccagatgatgtccgcgtctccatgactggtttatcgacaggaccc
agcgggagacctgcatcccgaagagcccgtgcaggttctcacagtcactcgcattcccat
ggacacagccgcccccattctcaccacgaacctgaaaacgaatctatcgatcccgacttg
gagtcaggagagccgagcacctccttctctgaattccgttacctttttcgctggattcaa
aaaagtcttccgttcataatcatcctcagtgctaagcttattattcagcacgccttgggg
cttgctgttggaattggcttgtttacaacttttttatatgtaaacaaaaatattcagacc
caagtgttcctccaggatcgacgttcaaagttgcagtgtgtttggcttttgctgtttctg
acatcttccacacttttgctctactacactttcctcagcgatgcactttactactgtctc
atttttatgagccctagtatcgagcccctgggcttctgggaagtcttatgggctgttggg
gtgaccaactctgttgtgaagttcatcttcatgggattaaagtgccttattctcatactc
cccccctccatggctgcatacaggactcaggggaaatggtttatgatgacagaggaggtt
gggcaggtttaccaagcagtggtgcccatgccaacctggtttcgcttcctggtgacgtac
caggagatggatggtcgcaccgggctgaccctgggcatcctgcttgctttgggctaccta
atactgaagcttttggaactttatggacaatggggttctctccagaagacaaccagcatc
tttttcagcaacgagcatagcggggccgcagccaccaagagtcagtgtgctgacgcaggg
gacgtctgccccatatgtcaggcagagtacagggagcccagagtcctcctgtgtcagcat
atcttctgcgaggagtgcgtggctttgtggttgaaccaggagaagacgtgccctctctgc
agaaccgtaatcacggacaaagtacacaagtggaaaaacggtgccacttctgcttactta
caaatatactga
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integrated database retrieval system
