Clupea harengus (Atlantic herring): 105907489
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Entry
105907489 CDS
T09045
Symbol
rab40b
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105907489 (rab40b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
char04031
]
105907489 (rab40b)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
105907489 (rab40b)
GTP-binding proteins [BR:
char04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
105907489 (rab40b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
105907489
NCBI-ProteinID:
XP_012691295
Ensembl:
ENSCHAG00000015219
UniProt:
A0A6P3W6U4
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All DBs
Position
1:complement(15144672..15163711)
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AA seq
292 aa
AA seq
DB search
MGHRSDASLRMNHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGARESPYGYNMGID
YKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIK
EIDEHAPGVPKILVGNRLHLAYKRQVTTEHAQVYAERLGVTFFEVSPLCNFNITESFTEL
ARTVLTRHGMQRLWRPSRVLSLQDLCCRSIVSCTPVHLVDKLPLPPALKSHLKSFSVANG
LNARMMHGRSYSLAAAPTATKKRPGPNKKKKKLLRPPLAVSHSCAPTSCKIA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgggacatcgcagcgacgcttctctcaggatgaaccaccgatcgagcccggctaaggcc
tacgactttctgctcaaattcctgctggtcggagacagcgatgtggggaagggggagatc
ttggccagccttcaagatggagcaagagagtctccgtacggatataacatgggaatcgat
tacaagaccactactattcttctagatgggcggcgtgtgaaacttcagctctgggacact
tctggccagggaagattctgcaccatcttccgatcgtactctcgaggagcacagggagta
atcctggtgtatgacatcacaaatcgctggtcctttgatggcatcgatagatggattaaa
gagatcgatgagcatgcaccaggggtgcctaagatcctggtagggaaccggctccacctg
gcctacaagcggcaggtgaccaccgagcatgctcaggtgtacgccgagcgcctgggcgtg
accttcttcgaggtcagccctctgtgcaacttcaacatcacggagtcgttcacggagctg
gcccgcaccgtgctcacgcgccacggcatgcagaggctctggaggcccagcagagtgttg
agcctgcaggacctgtgctgccggtccatcgtgtcctgcactccggtgcacctggtagat
aagctgccgctgccgccggcgctgaagagccacctgaagtccttcagcgtggccaacggg
ctgaacgcgcgcatgatgcacgggcgctcctactccctcgccgccgcccccaccgccacc
aagaagaggcccgggcccaacaagaagaagaagaaactcttacgccccccgctggccgtc
tcgcactcctgcgcccccaccagctgcaagatcgcgtag
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