KEGG   Clupea harengus (Atlantic herring): 105907501
Entry
105907501         CDS       T09045                                 
Symbol
pdlim3a
Name
(RefSeq) PDZ and LIM domain protein 3a
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105907501 (pdlim3a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:char04990]
    105907501 (pdlim3a)
Domain-containing proteins not elsewhere classified [BR:char04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   105907501 (pdlim3a)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 105907501
NCBI-ProteinID: XP_012691307
Ensembl: ENSCHAG00000019108
UniProt: A0A6P3W8D6
LinkDB
Position
22:20685146..20695876
AA seq 317 aa
MSLNVVLDGPAPWGFRLVGGKDFSQPLSISRINPGSKAAMANLCPGDIIIAIGGMPAENL
MHSEAQNRIKDCGHQLCLTIERPETRLWSPHISEDGKVNPFKINLEAEQQEYQPIGTGHN
RQAQPFVAAANIDDKRQLVSASYNTPIGLYSSGNIQDAMHGQMRGLVPDKPHSPRTLTSI
EESDVYRMLQKDQEQDEPDEPRQSGSFKALQEFVNSDGTRPLLTRTVRAPTTKPAAPTGN
LQKLPVCDKCGNGIVGTVVKARDKFRHPGCFVCSDCDMNLKQQGYFFVEGQLYCETHARA
RTRPPEGHDLVTAYTSA
NT seq 954 nt   +upstreamnt  +downstreamnt
atgtcactgaatgtcgtcctggatggacctgccccatggggcttcagactagtcggggga
aaggacttcagccagcccctgagcatctccaggattaaccctggcagtaaagcagccatg
gcaaacctgtgtcctggtgacatcatcatagcgattggaggcatgcctgctgaaaatctg
atgcacagtgaggcccagaacagaatcaaggattgtggccatcagctgtgtctcactata
gagaggcctgagacaagactgtggtcaccacacatatctgaggatgggaaggtcaaccca
tttaaaatcaacttagaggcagagcaacaggagtatcaaccaataggaacaggccacaac
cgtcaggcccagccctttgtggctgcagcaaacatcgatgacaagcgtcagctggtgagc
gcttcctataacacccccatcggtctctactcttctggcaacatccaggacgccatgcat
ggccagatgaggggcctagtcccggacaaaccccatagcccccgaacgctgacctccatc
gaggagtcggatgtgtaccggatgctgcagaaggaccaggagcaggatgaacccgatgag
ccccgccagtctggctccttcaaggccctgcaggagttcgtcaacagtgacggtactcgt
ccgctgttgaccaggactgtgagggctcccaccactaaacctgccgctccgaccgggaac
ctgcagaaactgcctgtgtgcgacaagtgtggcaacgggatagttgggacagtggtgaaa
gcaagggacaagttccgtcaccctggctgttttgtctgctcagactgtgatatgaacctt
aagcagcaaggctatttcttcgtggagggtcagctgtactgcgagacccatgcccgtgcc
cgcacaagacctccagagggtcacgatcttgtgacagcttacacttctgcgtag

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