Clupea harengus (Atlantic herring): 105907504
Help
Entry
105907504 CDS
T09045
Symbol
pax7a
Name
(RefSeq) paired box protein Pax-7a isoform X7
KO
K09381
paired box protein 3/7
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907504 (pax7a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105907504 (pax7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
105907504
NCBI-ProteinID:
XP_012691313
Ensembl:
ENSCHAG00000008924
UniProt:
A0A6P3W8E0
LinkDB
All DBs
Position
5:10612395..10683652
Genome browser
AA seq
509 aa
AA seq
DB search
MATLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEE
YKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKDDDDDCDKKD
EDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
PTLPTYQLPESGYPGATLSQDGSSTLHRPQPLPPSSMHQSGLSADSGSAYGLSSANRHGF
SSYSDTFMSPSASGNHMNPVSNGLSPQVMSILSNPSAVPSQSQHDFSISPLHGSLESSNP
ISGSCSQRSDSIKGGVDSLASSQSYCPPTYSASSYSVDPVAAGYQYSQYGQTAVDYLAKN
VSLSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctactttaccaggaacagtaccacgaatgatgcgtccagccccaggccagaactat
ccccgaaccggattccctttggaagtatcaacaccactgggccaaggtcgagtgaatcaa
ctcggtggagttttcatcaatggaaggcctctgccaaatcatatccgacacaagatagta
gagatggctcaccacggcatccggccctgcgtaatctcgcgacagctgcgagtctcccac
ggctgtgtgtccaaaatcctctgtcggtaccaggagacgggctcgattcgtcctggggca
ataggtggaagcaaacccaggcaggtggcaacgccggacgtggaaaagaggattgaggag
tacaaacgcgaaaacccggggatgtttagctgggagataagagacaaactcctgaaggac
ggggtgtgcgacagaagtacggttccttcaggtgaggcctcatccgtgagctctattagc
cgggtattgcgcgcacgctttgggaagaaagatgacgatgatgattgtgataaaaaggat
gaagacggggagaagaaaaccaaacatagcatcgatgggatacttggggataaaggtaac
cgcacggacgagggctcggacgtggagtcggagccggacctgcccctgaagaggaagcag
cggcgcagcaggaccaccttcacggcggagcagctggaggagctggagaaggcattcgag
cgcacgcactaccccgacatctacaccagggaggagctggcccagaggaccaaactcaca
gaggcacgcgtgcaggtgtggttcagcaaccgaagagccaggtggcgtaagcaagcagga
gccaatcagctagctgcattcaaccaccttctgccaggtggcttccctcccactggaatg
cccaccttacccacgtaccagcttcccgagtccggctaccccggcgccaccctctcacaa
gatgggagcagcacgttgcaccggccccagcccctgcctccgtcctccatgcaccagagc
gggctctcggcggacagcggctccgcctacggcctctcgtcggccaatcggcacggcttc
tccagctactcagacaccttcatgagcccgtcggcctccggcaaccacatgaaccccgtc
agcaatggcctctccccacaggtgatgagcatcctgagcaaccccagcgcagtgccctct
cagtcccagcacgacttctccatctcccccctccacggcagcctggagtcctccaacccc
atctcgggcagctgcagccagcgctctgactccatcaagggcggcgtggacagcctggcc
tcctcccagtcctactgcccccccacctacagcgcctccagctacagcgtggaccccgtc
gccgccggataccagtacagccagtacggccaaacagccgtggactacctggccaagaac
gtgagcctgtccacccagagacgcatgaagctgggggaccactccgctgtcctgggcctg
ctgcaggtggaaacgggccaggcctactga
DBGET
integrated database retrieval system
