Clupea harengus (Atlantic herring): 105907532
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Entry
105907532 CDS
T09045
Symbol
otulinb
Name
(RefSeq) OTU deubiquitinase with linear linkage specificity b isoform X1
KO
K18343
ubiquitin thioesterase otulin [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105907532 (otulinb)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105907532 (otulinb)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
105907532 (otulinb)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C101
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
105907532
NCBI-ProteinID:
XP_012691341
UniProt:
A0A6P3W720
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All DBs
Position
25:complement(6817421..6822207)
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AA seq
544 aa
AA seq
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MGNCCKGQSENNLVNREGFLKEKAKNPGVIAKSDGVSQEEAVEGYKRNAMSGNGSVRTSV
KSYSAVLRNEVHPVPVKTTMPPVHPGEEDPDGHWDSVKQDNRLQELTLGLPSTSSSDCQA
KRAEIQECNRFGDDSHVNCSQPKEGNAVGSCEQIAEPNDENRPRLARTMDRTTPAMLSTS
QDKATVRIGSEEHKVPVTSIMPEEDHSEEDLYRGEEEIEKERHAKDSTCPGSQSALASED
QCSVEEPVDLLTYSQREWRGNTSKSVLIRKGYEKISHEFDGLRRVRGDNYCALRATLFQL
FTKSNQLPAWLENHDISLWPTEIPSEKDLVDQWKFPFENWSSTGGAVEQLGHYLKLLKKR
WQEAVEARGPEEREALCQEVFQGREEEYGLLEALKFLMLRTAAQLHGASERGDAVPEFCC
LLFARDSSRCPRSLLTNHLQHVGFSGGLEQVEMFLLGYSLQQTIQVYRLYKADTEEFATY
YPDDHKEDWPHLCLLTEDDRHYNVPVPRTQKASKPNSSGKPLWLPPSGSTPMHGPPNQTG
RTYV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactgctgcaaaggccaatctgaaaataacctcgtgaacagagaaggtttcctg
aaagaaaaagcgaagaaccctggggttatcgccaaaagtgatggcgtatctcaggaagag
gctgtggaggggtacaagaggaatgcaatgtctgggaatggttcagtaagaacatcagta
aaaagttacagcgccgtccttaggaatgaggtccatcccgtgcccgtaaagactactatg
cctccggttcatcccggggaggaggacccagatggtcattgggattctgtcaaacaagat
aaccgcctacaagagttaacattaggcctgccttctacttcctcttctgactgtcaagcc
aaaagggctgaaatacaagagtgtaaccgatttggggatgactcccacgtgaactgttca
cagccgaaagagggaaatgctgtagggagctgtgaacagattgctgaaccaaatgatgaa
aaccggcctagactggcgagaaccatggacagaactaccccagcaatgctgtcaacatct
caggacaaagccactgttcgaataggctcagaagaacacaaggttcctgtcacctccata
atgccagaagaggaccacagtgaagaagacctgtatagaggagaggaagaaattgagaag
gaacgacatgcaaaagacagcacgtgtcctgggagtcagtcagcattggcttcagaggac
cagtgcagtgtggaagagccagttgacctcctgacctatagtcaaagagagtggagggga
aacaccagcaaaagtgtccttatcagaaagggttatgagaagatatcccacgagtttgac
ggcctgcgcagggtgaggggggataactactgcgcactaagggctaccctctttcagctc
ttcactaagtccaatcaacttccagcctggttagaaaaccatgatatcagcctgtggcca
acagagattccatctgagaaggatctggtagatcagtggaagtttccctttgagaactgg
agcagcaccgggggagctgtggaacaactgggccactatctaaagctcctgaagaaacgg
tggcaggaggcggtggaggcccgcgggccggaggagagggaggctctgtgccaggaggtg
ttccagggtagggaggaggagtacgggctcctggaggccctcaagttcctcatgctgcgg
acggccgcacagctgcacggcgccagcgagcgcggggacgccgtgcccgagttctgttgc
ctgctgttcgcccgcgactcctcccgctgccccagaagccttctgaccaaccacctgcag
catgtgggcttcagcggagggctagagcaggtggagatgtttctccttggctactcccta
cagcagaccattcaggtctaccggctctacaaggccgacacggaagagttcgccacctac
taccctgatgaccacaaagaggactggcctcacctttgtctgctgacggaggacgacagg
cactacaatgttccagtccccagaacgcagaaagcatctaagcccaactcctcaggcaag
cccttgtggcttccgccctcaggaagtacacctatgcatggaccccctaaccagacaggg
aggacctacgtctaa
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