Clupea harengus (Atlantic herring): 105907568
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Entry
105907568 CDS
T09045
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105907568
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
105907568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
TPR_12
TPR_NPHP3
TPR_10
C19orf12
Motif
Other DBs
NCBI-GeneID:
105907568
NCBI-ProteinID:
XP_012691384
Ensembl:
ENSCHAG00000016665
UniProt:
A0A6P3W8F6
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Position
7:complement(1207206..1215063)
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AA seq
629 aa
AA seq
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MDLKTAVFNAARDGKLRLLQKLLENKSDPEVTKLTSEKTNGATPLLMASRYGHLELVEYL
LECCSAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLVGHGASVNNTTLTNSTPL
RAACFDGHLDIVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKSV
KGNTALHDCAESGSLEILRLLLDYGARMERDGYGMTPLLSASVTGHANIVDFLVQLPLTP
PPERADALELLGATFVDKKRDLLGALQHWRQGLELRHTDPVSLLPKAPHEQLVAAYDFAV
EVTSEEELDALISDPDGMRMQALLIRERVLGPAHPDTSYYIRYRGAVYADSGNFERCVAL
WSYALDMQQRHLEPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFHDLMAILGKSVL
EIERAIKQKSDGAGSVTTAAATPVPDPAQLSKALSIILHLICLLEKVPCTLEQDHLKKET
IYRFLKLRPCGKNGSSPLHLAADRATTCVGRYPVCRFPSLQVAAVLLECGADVNCRDAQD
NSPLHVAASNQQPELMRLLIDRGTHFDSTNAMRQTACDLLGQKELARSLIQPVNHTTLQC
LAARAIIHHGLVYQGNIPQRLEDFVLLHR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaacggctgtattcaacgctgccagagatgggaaactccggctgctccaa
aaactattggaaaacaaaagtgaccccgaggtcacgaaacttacgtctgaaaaaacaaac
ggggcaaccccactacttatggcttcgagatacggacaccttgagctggtggaatacctt
ttggaatgttgttcagccccagtcgaggttgggggatctgtcaattttgacggcgagaca
atagaaggggctccaccgttatgggctgcttcggccgctggacacctaaaagtggtacag
tcgttggtaggccatggcgcttccgtaaacaacaccacccttactaactcaacgcccctc
agagccgcttgttttgacggacatctcgacattgttaaatacctggtggaacataaagca
gaccttgaagtggctaacagacatggccatacatgcctcatgatttcctgttacaagggc
cacaaggaaattgctcaatacctcctggaaaagggggcagatgtcaacagaaaaagcgtg
aaaggtaatacagccctgcatgactgtgccgagtcaggcagcctggagatccttcgcctg
ctgttggattatggtgctcgaatggaacgcgacggttatggcatgacaccgttgctgtcg
gccagtgtgacgggccatgccaacatcgtggacttcctggtccaactcccactcacgccc
cctcctgagcgagcggatgcgctggagctgctgggtgccacgttcgtggacaagaagcgt
gacctcctgggggccctgcaacactggcgccagggcctggagctgcggcacacggacccc
gtcagcctcctacccaaggctccgcatgaacaactcgtggcagcgtatgactttgcagtg
gaagtgaccagtgaggaggagctcgatgcgcttatctccgatcccgacggcatgcgcatg
caggccctgctgatccgtgagcgtgtcctcgggcctgcccacccagacacctcgtactat
atccgctaccgtggtgccgtctacgccgactctggcaactttgagcgctgtgtggcgctg
tggagctatgccctggacatgcaacagcgccaccttgagcctctgagccccatgacggcg
agcagtctgctatcctttgccgaactcttctccttcatgttgcaggaccgtgcaaaaggc
cttcttggcacttctgtttccttccatgaccttatggccattttgggcaagagtgtgctg
gagattgagcgtgcgattaaacagaagtctgatggcgcaggctcagtaacgaccgcggca
gccactcccgtcccagacccagcccagctgagtaaagcactctccatcatcctgcacttg
atctgcttgctggaaaaagtgccctgtacgctggaacaagaccacctaaagaaggagacc
atctaccgtttcctgaaacttcggccgtgcggcaagaacggctcaagcccactgcacctg
gcagctgaccgggccaccacgtgcgtgggccgctaccctgtgtgccgtttcccctctctg
caggtggcggcggtgctccttgagtgtggggctgacgtcaactgccgcgacgcacaagac
aattctcccctccacgtggctgcctccaatcaacagcctgagttgatgcggctgctgatt
gatcggggcacacacttcgacagcaccaacgcaatgcgacaaactgcctgtgacctgttg
ggccagaaggagctggcacgcagtctcatccaaccagtcaaccacaccacactgcagtgc
ctggccgcccgtgccatcatccaccatggcttggtctaccaaggcaacataccgcagcgc
ctggaggactttgtgctcctgcacagatag
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