Clupea harengus (Atlantic herring): 105907572
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Entry
105907572 CDS
T09045
Name
(RefSeq) transcriptional enhancer factor TEF-5-like isoform X2
KO
K09448
transcriptional enhancer factor
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907572
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
105907572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
Motif
Other DBs
NCBI-GeneID:
105907572
NCBI-ProteinID:
XP_012691392
Ensembl:
ENSCHAG00000003280
UniProt:
A0A6P3W8F9
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All DBs
Position
5:13207054..13263266
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AA seq
433 aa
AA seq
DB search
MASNEWSPNGSPERGLEDTQDELEKAMDGDAEGVWAPDIEQSFQEALAIYPPCGRRKIIL
SDEGKMYGRNELIARYIKLRTGKCRTRKQVSSHIQVLARKKVREYQAGIKAMNLDQASKD
KALQNMAALSSAQIVSPNLIKSQLPPLPQPPYPPPARFWPTSIPGQPGPSSQDIKPFAPS
YPSLSAPGPPAIPSYEPMVPPGPPAATAVPVWQDRTIASSKLRMLEYHAFMEVQRDQDTY
SKHLFVHIGQMNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYEKGPQNAFFLVKFWADL
NSSGMADGPGSFYGVSSQYSSLENMTITVSTKVCSFGKQVVEKVETEYARMEGGRYVYRI
HRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRETQETLMCIAFVFEVSTSE
HGAQYHVYRLIKD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacgagtggagccccaacggcagcccggagcgggggctggaggatacccag
gacgagctggagaaggccatggacggcgacgccgagggcgtgtgggcgcccgacatcgag
cagagcttccaagaggccctcgccatctacccgccctgcggacgccgcaagatcatcctg
tcagacgagggcaagatgtatggtcgtaacgagctgatcgccaggtacattaagctgcga
acaggaaagtgtcgcaccaggaaacaggtgtctagtcacatacaggtgttagcgcggaag
aaagttcgggagtaccaggctggcattaaggccatgaacctggaccaggcttccaaagac
aaggctctgcagaacatggctgcattatcctcagcccagatcgtgtctccaaacctgatc
aagagccagctgccgcccttaccccagcccccctacccgcccccggctaggttttggcca
acgtccatccctggacaacctggaccctcttctcaggacatcaagccctttgccccctcc
taccccagcctctcagcacccgggccacctgccataccctcgtatgagcccatggtgccc
cctggcccccctgcagccaccgctgtgcccgtgtggcaggaccgcaccatcgcctcctcc
aaactacgcatgctggagtaccacgccttcatggaggtgcagcgcgaccaggacacctat
agcaaacacttgtttgtccacatcggtcagatgaacccttcctacagcgaccccctcctg
gaggcagtggacatcagacagatctacgacaagttccctgagaagaagggtgggctgaag
gagctctatgagaagggcccacagaacgccttctttctggtcaagttctgggcggacctg
aacagcagtgggatggcggacggtcccggctccttctacggcgtgagcagccagtacagc
agccttgagaacatgaccatcaccgtatccaccaaagtctgctccttcggcaagcaggtg
gtcgagaaagtagagacagagtatgctaggatggaaggagggaggtatgtgtacaggatc
caccgctcgccaatgtgtgaatacatgatcaacttcatccacaagcttaaacacctgcct
gagaaatacatgatgaacagtgtgttagaaaacttcactattttacaggtcgtgacgaac
cgggagacccaggagacgttgatgtgtatagcgttcgtgtttgaggtgtcgacgagtgaa
cacggagcgcagtaccacgtgtatcgcctcatcaaggactga
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