Clupea harengus (Atlantic herring): 105907576
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Entry
105907576 CDS
T09045
Name
(RefSeq) synphilin-1
KO
K04558
synphilin-1
Organism
char
Clupea harengus (Atlantic herring)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
105907576
NCBI-ProteinID:
XP_031425962
Ensembl:
ENSCHAG00000019782
UniProt:
A0A6P8FS45
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Position
7:1522743..1535487
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AA seq
851 aa
AA seq
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MDVPEYLDLDEIDFSDDLAYSAKSIPELCRRNDGQNEERQAPAINWSRGVPHNGAGVKPT
GIADVYSKFRPVKRVSPLKHQPEVPDSEAESKGPTQNGERSNDEPNVAKAGQVVGGAPSA
GEAQGVKPRMGVNAGALLGELEHYDLDMDEILDVPYIKSSQQMATLPRRSHSLARTSTLP
HSESSTAGPQLCVLSPVKWADMRKSKSLEPDFLRSPTGAFQPVCPSSAAALHCSSTPEGG
ALASSRPFPEMQALKGGSEASGSQSMLFPLQGGTAGRQEAGKAWGGSRAHGECDEEAKKN
QNIINIVREGQISLLPHLAADNLELIRDEEGSNLLHVSASHGHADCLQHLTSLMGEDCLT
ERNLEQLTPAGLAVQNGHLECVRWMVSETEAIAELSCTREHPSLIHYAGRYGQERILLWL
LQFMQEQGISLDEVDQQGNSAVHVAAQHGHLGCIQTLVEYGSNVTVQNQQGERPSQSAER
QGHTTCSRYLVVVETCMSLASQVVKLTKQLHEQTTARVTLQNQMQLLLQPLEADGSQPLS
PSHLIPPAESWPEMTLTAEVSAGDGQWVLRQRGAESETMIRKLLGGEQPERAGEGGAQRR
LGVAEKRDLKLARLKQLMQRSLSESDSDVYPPDDAKQAPGTASGTAPRPERPNQLPLAAA
DELPAPPAGPAGLYTLTKKHPHHPHPAQGSTAERKLSFALRTSRSVDGPDPSPTSDEADP
EANSDAGGQKVATSPKSALKSPSSRRKTAQNLKLRVTFDEPVAHKEAPEGEARAAAGEKA
GSSRTSESGETWKRPFGTFRSIMETLSGNQNSNNNNVQSGTGSPQGPTGRKTDGKAGATG
LPKGRSKPSAV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcccagagtacctggatctggacgagattgacttcagtgacgacttagcttac
tcagccaagagcattccagagctgtgcagaaggaacgatgggcagaatgaagagagacaa
gccccagccatcaactggagccggggcgtgccgcacaacggggctggtgtcaaaccgacc
ggcatcgccgacgtgtacagcaagttcaggccggtcaagcgcgtgtcaccgctcaaacac
cagcctgaggtgccggacagcgaggcggagagcaagggcccaacgcagaacggcgagcgg
agcaacgatgagccaaatgtggccaaagcgggccaggtggttgggggggcaccatctgcc
ggcgaggcccagggtgtgaagccccgcatgggagtgaatgcaggggccttgctgggagag
ctggagcattatgacctagatatggatgaaatcctggacgtgccctatatcaagtccagc
cagcagatggcgactctgcccaggaggagccatagtctggcccgcacctccaccctgccc
cacagcgagagctccaccgcgggcccccagctctgcgtcctctcccctgtcaagtgggcc
gacatgcgcaaatccaaatccctggagccagacttcctgcgctctccgacgggcgccttc
cagccggtgtgcccctcctctgccgccgctctgcactgctcctccactccagagggaggc
gctctggctagtagtaggccgttccccgaaatgcaggctctaaagggagggtcagaagca
tcggggagccagtcgatgctgttccccctgcaaggaggcaccgctggcaggcaggaggcg
gggaaggcctggggcggctccagggcacatggggaatgtgacgaagaggccaaaaagaac
cagaacatcatcaacatcgtccgcgagggacagatctcactgctgcctcacctggcagct
gacaatttggagctgatccgggacgaggagggcagtaacctgctccatgtgtcggcctct
cacggccacgcagactgcctgcagcacctcacctcgctgatgggggaggactgcctgacg
gagcgcaacctcgagcagctcacccccgctggtctggcagtgcagaatgggcacctggag
tgtgtgcgctggatggtgagcgagacggaggcgatcgccgagctgagctgcacacgggag
caccccagcctcatccactacgcaggccgctatggacaggagcgtatcctgctgtggctg
ctccagttcatgcaagagcagggcatctctctggacgaggtggaccagcaggggaacagc
gccgtgcacgtggccgctcagcacggacacctgggctgcatccagaccctcgtggaatat
ggctcaaacgtgaccgtgcagaatcagcaaggcgagcggccttcccagagtgccgagcgg
caaggccacaccacctgttcccgctaccttgttgtcgtggagacgtgcatgtcattagcc
tctcaggtggtgaagctcaccaagcaactccacgagcaaacgacagccagagtgacctta
cagaaccagatgcagctcctcctgcagccactggaggcagatggatctcagcccctgtcc
ccaagtcacctgatccccccggcggagtcctggcctgagatgaccctgacggcagaggtg
tccgcgggggacgggcagtgggtgctgaggcagcgcggggccgaatcagagaccatgatc
cggaagcttctgggtggagagcagccggagcgggcgggtgagggcggggctcagaggcgg
ttgggcgtcgctgagaagagagatctgaagctggcgcggctcaagcagctgatgcagcgc
tccctcagcgagtcggactcggacgtgtacccgcccgacgacgccaagcaggcccctggg
acggcctctgggacggcccccaggcccgagcggcccaatcagctcccccttgctgcggca
gatgagctgccagcgccccctgctggccctgctgggttgtacacgctgacgaagaagcat
cctcatcatcctcacccagctcagggctccaccgccgagcgcaagctctcctttgcgctc
aggacttctcgatccgtggacggaccggacccctcgcccacgtcagacgaggccgaccca
gaggccaactctgacgcaggggggcagaaggtggcaaccagccccaagagcgcgcttaaa
tccccttcgtcccgccgcaagaccgcccagaacctgaagctgcgcgtcacctttgatgag
ccagtcgcccacaaggaggcgccagagggcgaggcccgagcggccgcaggggagaaggcc
ggcagcagccgcacctctgagtccggagagacgtggaagaggcctttcgggacgttccgc
tccatcatggagacgctgagcggtaaccagaacagcaacaacaacaatgtccagtccggt
actgggtcgccacaggggccgacaggtaggaaaacagacggcaaagctggggccacgggc
ctgcccaagggccggagcaagcccagcgcagtctaa
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