Clupea harengus (Atlantic herring): 105907593
Help
Entry
105907593 CDS
T09045
Symbol
slc16a1a
Name
(RefSeq) monocarboxylate transporter 1a
KO
K08179
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105907593 (slc16a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105907593 (slc16a1a)
04147 Exosome [BR:
char04147
]
105907593 (slc16a1a)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC16: Monocarboxylate transporter
105907593 (slc16a1a)
Major facilitator superfamily (MFS)
Organic acid transporters
Monocarboxylate transporter (MCT) family [TC:
2.A.1.13
]
105907593 (slc16a1a)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of microglial cells
105907593 (slc16a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Ninjurin
Motif
Other DBs
NCBI-GeneID:
105907593
NCBI-ProteinID:
XP_012691413
Ensembl:
ENSCHAG00000011106
UniProt:
A0A6P3W750
LinkDB
All DBs
Position
5:complement(11098434..11116668)
Genome browser
AA seq
461 aa
AA seq
DB search
MPPAVGGPVGYTPPEGGWGWMVVVGAFISIGFSYSFPKSITVFFKEIEVIFNATSSQVSW
ISSIMLAVMYAGGPISSIMVNKYGSRPIMMAGGCLSGIGLIAASFCDTVEGLYFCVGVIG
GLGLAFNLNPALTMIGKYFFKKRPIANGIAMAGSPVFLSTLAPLNTWLFDHFGWRGSFLI
LGGMLLNCCVAGSLMRPIGPKPPPPVTASNGGAQEKRSAIEKINGFIDLTLFKHRGFILY
LTGNVVMFFGLFSPLVFLSNYAKSHHIPKEKAAFLLSILAFVDMVARPTMGIVANTKWVR
PRVQYFFAASVLLNGVCHVLAPQSVDYTGFIIYAIFFGFAFGWLSSILFETLMDLVGAQR
FSSAVGLVTIIECGPVLLGPPMLGKLNDIYHDYKYTYYSCGIILMIASVVLFVVMGINYR
LLDKEAKEEAKKAKLEADFKDNGARERGRTDEDGKTAEDAV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgccgtggggggacccgttgggtacaccccgcccgagggtgggtggggctgg
atggtcgtggttggggccttcatctccatcggcttctcctactccttccccaagtccatc
accgtcttcttcaaggagatcgaggtcatcttcaacgccaccagctcccaagtgtcctgg
atctcctccattatgttggccgtcatgtacgctggaggtcctatcagcagtattatggtg
aataaatatgggagtcggccgatcatgatggctggtggatgcctctctgggattggcctg
attgctgcctccttctgtgacacggtggagggcttgtatttctgtgtgggagtgatagga
ggtctaggattggcatttaatctgaatccagctctcaccatgattggcaaatacttcttc
aaaaagaggcccattgccaatggcattgccatggctggtagcccagttttcctctcaaca
ctagctcccctcaacacctggttgttcgaccattttggctggaggggcagtttcctgatt
ctgggtgggatgttgctgaactgctgtgtggccggctccctgatgcggcccattgggccc
aaaccgccgcctccggtgacggccagcaacggcggagcccaagagaagcgctcagcgatc
gagaagatcaatggcttcatcgacctgacgctgttcaagcaccgtggcttcatcctgtac
ctcacgggcaatgtggtcatgttcttcggtctcttctcgcccctggtcttcctcagcaac
tacgccaagagccaccacatccctaaggagaaggccgccttcctcctgtccatcctggcc
tttgtggacatggtggcccggcccaccatgggcatagtggccaacaccaagtgggtgcgg
cccagggtgcagtacttcttcgccgcctctgtgctcctgaatggggtgtgccacgtgctg
gcgccccagtcggttgactacacaggcttcatcatctacgccatattctttggttttgcg
ttcggctggctcagctccatactctttgagacgctcatggacctggtgggggcccagcgc
ttctccagcgctgtgggactggtgaccatcatagagtgtgggcctgtgttgcttgggcct
cccatgctagggaaattaaatgacatctaccacgattataagtacacatactacagctgt
ggaatcattctgatgatagccagcgtggtgctgtttgtggtcatggggatcaactacagg
ctgctggataaggaggcaaaagaggaggccaagaaagccaaactggaggcagatttcaag
gacaatggtgccagagagaggggcagaacggatgaggatggcaaaaccgccgaggatgct
gtgtaa
DBGET
integrated database retrieval system