KEGG   Clupea harengus (Atlantic herring): 105907641
Entry
105907641         CDS       T09045                                 
Symbol
pgap4
Name
(RefSeq) transmembrane protein 246
  KO
K26235  post-GPI attachment to proteins factor 4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
char01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:char00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
    105907641 (pgap4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105907641 (pgap4)
Membrane trafficking [BR:char04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Post-GPI attachment to proteins factors (PGAP)
    105907641 (pgap4)
SSDB
Motif
Pfam: PGAP4 Glyco_tranf_2_3
Other DBs
NCBI-GeneID: 105907641
NCBI-ProteinID: XP_012691459
Ensembl: ENSCHAG00000020312
UniProt: A0A6P3W766
LinkDB
Position
26
AA seq 396 aa
MLRWRAVSVRHVRWSSPVTQGLFLCTLSFCVVLPLCCHRLMFSYYFLRFMHLDSMSEAAL
LDSYEKGQEALHFWQEMTSLKTSALTATSAPKIPELLVTVVTARRREGQDYHYLLQVMRR
LLSLLGDCGGRPCAEVLVCDVETAPSLNEDATLLEKQFLVVKRSGEEQSKKRGRLNTFER
EKQDYVYCLRKGWELRRPKHVVVLEDDALPKPDFFSVIQDLLSRSFTRNTLYVKLYHPER
LQRYWNPEPFRIMEWVGLGLVGASAVLLMFSCRSCLLSFSLSRFLFFTVYIMVAAELVGR
HYLLEVRRLSPQLYAVSPATECCTPAMLYPGNASARVADYLDQVACAKGNAKDTVLYKTA
RSAPGERAHSVEPNLISHIGAYSSVRTNPLRPKLLP
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgctgcgatggagagcggtctctgtccgacatgtgagatggtccagcccagtcacccaa
ggcctattcctctgtactctatcattctgtgttgttctaccgttgtgctgtcatcgttta
atgttctcttactactttctgagattcatgcacttggactccatgagtgaggcagctctc
ctagacagctatgaaaaaggtcaagaagcactacatttctggcaggagatgacctcatta
aaaacgtctgctctgaccgcaacatctgctccaaagatccctgaacttttagtcactgtg
gtcacagcgagacgtcgagagggccaggactaccactatctcctgcaggtgatgcggcgg
ctgctctctctgctcggggactgtggggggaggccctgtgctgaggtgctcgtgtgtgat
gtggaaacggctccgtcgttgaatgaggacgccacactgttagaaaaacagttcctggtg
gtcaagcgctcgggggaagagcagtcaaagaaaaggggtagactaaacacttttgagaga
gagaagcaggactatgtatactgcctacgcaaagggtgggaactaaggagacccaagcat
gtggtcgtcctagaggatgatgcgttgccaaaacctgacttcttttctgtaatccaagac
ctgctctcccggtccttcactcggaacaccctctatgtgaagctgtaccaccctgagcgc
ctgcagaggtactggaacccggagcccttccgcatcatggagtgggtgggcctggggctc
gtaggggcctctgctgtcctccttatgttttcctgccgttcttgccttctgtctttctca
ctttcccgtttcctctttttcactgtgtacatcatggttgccgcggagctggtcggtagg
cattacctgctggaggtgcggcgtctctccccacaactctacgctgtttctcctgcgaca
gagtgctgcacacctgccatgctctaccctggaaacgcctccgcccgggtggcagactac
ctggaccaggtggcctgtgccaaaggcaatgctaaagacactgtgctgtataagactgcc
cggagtgctccaggggagagggcacacagtgtggagcccaatctgatctctcacattggg
gcatactcttctgtcaggaccaaccctttgcgtcccaagctgctgccatag

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