Clupea harengus (Atlantic herring): 105907641
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Entry
105907641 CDS
T09045
Symbol
pgap4
Name
(RefSeq) transmembrane protein 246
KO
K26235
post-GPI attachment to proteins factor 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
105907641 (pgap4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105907641 (pgap4)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
105907641 (pgap4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PGAP4
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
105907641
NCBI-ProteinID:
XP_012691459
Ensembl:
ENSCHAG00000020312
UniProt:
A0A6P3W766
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Position
26
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AA seq
396 aa
AA seq
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MLRWRAVSVRHVRWSSPVTQGLFLCTLSFCVVLPLCCHRLMFSYYFLRFMHLDSMSEAAL
LDSYEKGQEALHFWQEMTSLKTSALTATSAPKIPELLVTVVTARRREGQDYHYLLQVMRR
LLSLLGDCGGRPCAEVLVCDVETAPSLNEDATLLEKQFLVVKRSGEEQSKKRGRLNTFER
EKQDYVYCLRKGWELRRPKHVVVLEDDALPKPDFFSVIQDLLSRSFTRNTLYVKLYHPER
LQRYWNPEPFRIMEWVGLGLVGASAVLLMFSCRSCLLSFSLSRFLFFTVYIMVAAELVGR
HYLLEVRRLSPQLYAVSPATECCTPAMLYPGNASARVADYLDQVACAKGNAKDTVLYKTA
RSAPGERAHSVEPNLISHIGAYSSVRTNPLRPKLLP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatggagagcggtctctgtccgacatgtgagatggtccagcccagtcacccaa
ggcctattcctctgtactctatcattctgtgttgttctaccgttgtgctgtcatcgttta
atgttctcttactactttctgagattcatgcacttggactccatgagtgaggcagctctc
ctagacagctatgaaaaaggtcaagaagcactacatttctggcaggagatgacctcatta
aaaacgtctgctctgaccgcaacatctgctccaaagatccctgaacttttagtcactgtg
gtcacagcgagacgtcgagagggccaggactaccactatctcctgcaggtgatgcggcgg
ctgctctctctgctcggggactgtggggggaggccctgtgctgaggtgctcgtgtgtgat
gtggaaacggctccgtcgttgaatgaggacgccacactgttagaaaaacagttcctggtg
gtcaagcgctcgggggaagagcagtcaaagaaaaggggtagactaaacacttttgagaga
gagaagcaggactatgtatactgcctacgcaaagggtgggaactaaggagacccaagcat
gtggtcgtcctagaggatgatgcgttgccaaaacctgacttcttttctgtaatccaagac
ctgctctcccggtccttcactcggaacaccctctatgtgaagctgtaccaccctgagcgc
ctgcagaggtactggaacccggagcccttccgcatcatggagtgggtgggcctggggctc
gtaggggcctctgctgtcctccttatgttttcctgccgttcttgccttctgtctttctca
ctttcccgtttcctctttttcactgtgtacatcatggttgccgcggagctggtcggtagg
cattacctgctggaggtgcggcgtctctccccacaactctacgctgtttctcctgcgaca
gagtgctgcacacctgccatgctctaccctggaaacgcctccgcccgggtggcagactac
ctggaccaggtggcctgtgccaaaggcaatgctaaagacactgtgctgtataagactgcc
cggagtgctccaggggagagggcacacagtgtggagcccaatctgatctctcacattggg
gcatactcttctgtcaggaccaaccctttgcgtcccaagctgctgccatag
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