Clupea harengus (Atlantic herring): 105907657
Help
Entry
105907657 CDS
T09045
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105907657 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105907657 (clasp2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
105907657 (clasp2)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
105907657 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
HEAT_2
RTP1_C1
Adaptin_N
Cnd1
PDS5
ParcG
IFRD
HEAT_DAAF5
TAN
UTP20
MMS19_N
Rb_C
DUF5955
Motif
Other DBs
NCBI-GeneID:
105907657
NCBI-ProteinID:
XP_031442066
Ensembl:
ENSCHAG00000023833
UniProt:
A0A6P8GVV4
LinkDB
All DBs
Position
19:24367357..24431770
Genome browser
AA seq
1514 aa
AA seq
DB search
MGENDNMDYFYQQILQKDVTCRLQVGPDLIDYLNDPQRSLDVEQDKSRLDKTIDELTGWV
NSSNFKVALLGIDIVAAFVDRLNERFRGYVGTVVPALVDRLGDSKDQVREQSQAVILKLM
EQSANPMFVWERLFTGFKHKNFRSREGVCFCLVATLNTFGAKPLSLSKIVPFLCTLTGDQ
NPQVREAAIVSLVDVYRHVGERVRADLSKSGLPQQRLQLILGRFDDMLHSGNVSFSQDRS
FDDDDSVDGSRPSSAQAFKVPKVPKKQEARRPSATGAKLTGSSKERAGAVDEEDFVKAFT
DVPTVQIYSSRDLEDNLNKIREILSDDKHDWDQRANALKKVRSLLVAGATEYDCFFQHLR
LLDSAFKLSAKDLRSQVVREACITVAYLSTLLGNKYDHGAEAIVPVLFNLIPNCAKIMAS
SGAAALRCIIRHTHVPRLIPLITSNCTSKSVSVRRRGYEFLELLLQEWQTHSLERHTSVL
VECIKKGIQDADSEARVEARKAYWGLQAHFPAEAESLYSSLEPSYQKTLQSCLKSSGSVA
SLPQSDRSSSSSQESLNRPLASKWSAAPGRVPAKSTGSPVSLQRSRSDVDVTAAAGAASR
QAGGAARRPAGSYASLDDASDKMDGRLRNKQTLSTVTPQTDSRGRSRTKMVSQSQRSDDS
DSAAGSRSGSPGRVLNSTALSMLSTAPRSIGTGAQRRSRIPRSQGASRDSSPTRLSVAPS
SLTHIYNGSKGGRVSRIPRPSVSQGCSREASRESSRDASPVRSFGPLASRHYSRSTGALH
VVEAFGAAGLGISQSSHLSSSVSAMRVLNPGSDVEEALADALLLGDMRSKKKPARRRYEQ
YGMYSDDDANSDASSACSERSYSSRNGSSIPTYMRQTEDVAEVLNRCASANWSERKEGLM
GLQTLLKNQRTLSRVELKRLCEIFTRMFADPHSKRDPRNFGSTESIISSASFKRVFSMFL
ETLVDFIGVHKEDLVDWLFVLLTQLLKKMGADLLGSVQSKVQRALDVTRESFPNEHQFTI
LMRFTVDQTQTPNLKVKVAILRYIETLTMQMEPTDFSNSSETRLAVSRIITWTTEPKSAD
VRKAAQAVLIALFQLNTPEFTMLLGALPKTFQDGATRLLQNHLRNTGNTAQAQTGSPLLR
HTPRSPAGWTSPLTSPTNTSQTLSPSAFDYDTENMNSEEIYSSLRGMSEAIQSFSVRSQE
DMTDSPRRREGEEEAECGRTALDNKTSLLNTMPMLSSREHGVSSDSSLGSSSKNLKDSSF
DSEGQPQSDDSGVDQSEAVAELLKELSNHSERVEERKAALCELMKLIRDTRTPTVWDEHF
KTFLLLLLETLGDGEHVIRALALRVLKEILSRQPWRFKNYAELTIMKTLEAHKDPHKEVV
RAAEETATMLANAINADQCIKVLCPIIQSADYPINLAAIKMLTKLMDQMPRENLLQLLPE
VVPGLIQGYDNSESSVRKACVFCLVAIYSVIGEDLKPYLSQLAGSKLKLLNLYIKRAQSG
SSSGDPPSESGPAP
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaatgacaacatggactatttttaccagcagattttgcagaaggacgtgacc
tgtcgactgcaggtcggcccagatttaatagactacctcaatgatccgcagaggtctttg
gatgttgagcaggacaaatcacggttagataagaccatagatgaactaacgggatgggtc
aactccagcaatttcaaggtggccttgctggggatcgatattgtagcagcatttgttgac
agactgaatgagcggttcagaggatatgtgggtacagttgtgccagcgctggtggaccga
ctgggcgactctaaagaccaggtgcgtgagcagtcccaggctgtcatcctgaagctcatg
gagcagagtgccaatcccatgtttgtttgggaaagattatttaccggctttaaacacaag
aacttccgcagtagagaaggagtgtgtttctgcttagttgccacccttaatacgtttggt
gccaaaccgctgagtctcagtaagatcgtgccatttctctgcacattaactggagaccaa
aacccacaggtgagggaggccgccatagtgtcactagtggatgtgtatcgtcacgtcggg
gagagagtgagggcagacctgagcaagagtggactgccccagcagcggctccagctgatt
ctgggccgctttgatgatatgcttcactctggaaatgtgagcttcagtcaagatcgcagt
ttcgatgatgatgactcggtggatggcagcaggccctcctcggcgcaggcctttaaagta
ccaaaagtacccaagaaacaggaggcgcgccgacccagcgctactggagccaaactaaca
ggttcatcaaaggagagagcaggagctgttgatgaagaagattttgtcaaagccttcact
gatgtgcctacagtccagatatattcttcacgggacttggaggacaacctgaataaaatc
cgagaaatcctgtcagatgacaaacatgactgggaccaaagagccaacgctctcaagaag
gttcgctctctgctggttgctggagcaacagagtatgactgtttctttcagcacctgcgg
ctgctggacagcgcctttaagctgtcagctaaagacttgcgatctcaggtggtgagagag
gcctgcatcacagtcgcgtatctgtccacacttctggggaataagtatgatcatggagca
gaagcgatcgttcctgtgctcttcaacctcatccctaactgtgccaagatcatggcctca
tcaggagctgctgctttacgctgcatcatacggcacacccatgttccacgtctgatccca
ctcatcaccagtaactgcacctctaaatccgtgtcagtgagaagacgtgggtatgagttc
ctggagctgcttcttcaagagtggcagacccactctctggagaggcatacttcagtgcta
gtggaatgcattaagaagggcatccaggatgcagactctgaagctcgagtggaggctaga
aaggcgtactggggtcttcaggctcatttcccagcggaggccgagtccctgtactcctca
ttagagccatcctaccagaaaactcttcagtcgtgcctcaagagctccggcagcgttgca
tccctgcctcagtccgaccgctcctcctcttcctcacaagagagcttaaaccgtcctttg
gcgtcaaagtggtctgctgcaccaggacgagttccagcgaagtcaacgggctccccagtg
tccttgcagcgttcccgtagcgacgtggatgtgaccgcagcagctggggcggcgtctcgt
caggcaggaggggcggcccggaggcctgcggggtcctatgcgtcactggatgatgcctct
gataagatggatggacgcctccgaaacaagcaaacgttgtccacggtgacgcctcagacc
gactccagggggaggagccgaacaaagatggtgtcgcagtcccagcgttcagatgattca
gattcagcagcggggtctcgctcaggctctcctggtcgagttctaaacagcacggctctg
agcatgctcagtacagccccccgcagcattgggacaggggcccagcgacgtagccgaata
ccacggagccagggagctagtcgagacagcagccccacacgcctgtctgtggctccttcc
agcctgactcacatctataatggatccaaaggagggcgtgtcagccgtatcccacggccc
agtgtgagtcagggctgcagtcgggaggccagccgtgagagcagtcgagacgccagccca
gtgcgctccttcggcccgctcgcatcgcgacactactctcgctctaccggtgcgctccat
gttgtcgaagcctttggggcagcaggcttggggatatcacagtctagtcatctgtcgtcc
tctgtgagtgccatgagggttttaaaccctggatcggatgtggaggaggctctggctgat
gctttgctgctaggagacatgcggagcaagaagaagcctgcacggcgacgctatgaacag
tacgggatgtactccgacgacgacgccaacagcgacgcgtccagcgcgtgctcagagcgc
tcgtactcgtctcggaacggcagcagcatccccacctacatgcgtcagacggaggacgtg
gctgaggtgctcaaccgctgcgcctcagccaactggagcgagaggaaggagggactcatg
ggtctccagaccctcctgaagaaccagcgtacactcagtcgtgtggaactcaagaggtta
tgtgagattttcaccagaatgtttgcagaccctcacagcaagcgagaccccagaaacttc
ggctcgacagaatccattatcagttctgcctccttcaagcgagtgttcagcatgtttttg
gagacgctggtggacttcatcggggttcataaggaggatttggtagactggttgtttgtg
ctactcactcagcttctaaagaagatgggtgctgacctcctgggatcggtccagtctaaa
gtgcagagggctttagatgtcaccagagagtcctttcccaacgaacatcagtttactatc
ctgatgcgcttcacggtagaccaaacacagactccaaacctgaaggtgaaggtggccatc
ttgcgatacatcgagacactgacgatgcagatggaacccactgacttctccaactccagt
gaaacccgactcgctgtctctcgcatcatcacgtggaccactgaacccaagagcgctgat
gtccgcaaggctgcacaagctgtgctgatcgctttgttccagctgaacacgcctgagttt
accatgttgctgggtgctttgcctaagaccttccaggacggagccaccagactactgcag
aaccacctgcgtaacacaggaaatacagcacaggcccaaactggaagccctctcctgaga
cacacccccagatcaccagccggttggaccagccctctcacctcccccaccaacacatcc
cagaccctgtcccccagtgcgtttgattatgacacagagaacatgaactctgaggagatc
tacagctctctgagggggatgagtgaagccatccagagcttcagcgtgaggagccaggag
gacatgactgactcaccccgcagaagagagggagaggaggaggcggagtgtgggcggacg
gcccttgataataagacctccctgttgaacactatgcccatgctgtcgtccagggagcac
ggcgtcagctccgactcttccttgggctcctcctccaagaatttgaaggattcctcgttc
gactcggaagggcagcctcagtcagacgacagcggagttgaccagtcagaggcagtggcc
gagctgctgaaggagctgtccaatcacagcgagcgtgtggaggagcgcaaggcggcgctc
tgcgagctcatgaagctgatccgagacacacgcacacctaccgtctgggacgagcacttc
aagaccttcctgctgctgctgctggagacgctgggggatggagagcatgtaatccgggcg
ctagctctgcgtgtactgaaggagattctgagcagacaaccatggcgcttcaaaaattat
gcagagctcaccatcatgaagaccctggaagcacataaagaccctcacaaagaggtggtg
cgtgcggcagaggagacggcgaccatgttggcaaacgccatcaacgcagaccagtgcatc
aaggtgctttgcccgatcatccagtcagccgactaccctataaacctggctgctataaag
atgctcaccaaactcatggaccagatgcccagagagaatctcctgcagctgctgcctgag
gttgttcctggactcatccagggctatgataactccgagagcagtgtgaggaaggcgtgc
gtgttctgtctggtggccatctactctgtgattggtgaagacctgaaaccttatctcagc
caattagctggcagcaagctgaagctgttgaatctctacattaagcgtgcacaaagtggt
tccagcagcggtgaccccccctcagaatcggggccagcaccgtaa
DBGET
integrated database retrieval system
