KEGG   Clupea harengus (Atlantic herring): 105907697
Entry
105907697         CDS       T09045                                 
Symbol
rnf5
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5 isoform X1
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105907697 (rnf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105907697 (rnf5)
Enzymes [BR:char01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105907697 (rnf5)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105907697 (rnf5)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-ANAPC11 RING_XB3-XBAT31 zf-rbx1 Prok-RING_4 Baculo_IE-1 zf-C3HC4_4 zf-UDP Rtf2 IBR_1 zf-RING_16 zf-RING_6
Other DBs
NCBI-GeneID: 105907697
NCBI-ProteinID: XP_012691514
Ensembl: ENSCHAG00000017430
UniProt: A0A6P3W788
LinkDB
Position
19:complement(25772330..25780237)
AA seq 205 aa
MATADPGPSNDSGPASRGFPSGEKSNERDGPSGSGGEGERERDRATFECNICLDTARDAV
ISLCGHLFCWPCLHQWLETRPSRQQCPVCKAGISRDKVIPLYGRGSSSQEDPRLKTPPRP
QGQRPEPESRGPFQGFGDTGFHMSFGIGAFPFGFFTTVFNTNDPFHRADYMGDHQGNGNP
NNGNNWQDSLFLFLAIFFFFWMLSV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcgaccgccgatcctggaccctcgaatgacagcgggccagctagtagaggattcccg
tctggggaaaaaagcaacgagcgagatggcccaagcgggagcggtggagaaggagaacgc
gagcgagaccgggccacgttcgaatgtaacatttgtttggatacggccagagatgcggtc
atcagtttatgtggccatctattctgctggccttgtctgcatcagtggctagagacgagg
cccagcagacagcagtgtcctgtgtgtaaggctggcatcagcagagacaaggttatcccc
ctctatggccgtggaagcagcagccaggaggaccccaggttgaaaaccccccctcgacct
caaggacagagacccgagccagagagtagagggcctttccaggggttcggagacacaggt
ttccacatgtccttcggcataggggcatttccattcggctttttcaccacagtcttcaac
accaatgaccctttccacagagcagattatatgggtgatcaccaaggcaacgggaaccct
aacaatgggaacaactggcaagactccctgttcttatttctggccatctttttcttcttt
tggatgctgagtgtgtaa

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