Clupea harengus (Atlantic herring): 105907699
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Entry
105907699 CDS
T09045
Symbol
hoxc13b
Name
(RefSeq) homeobox protein Hox-C13b
KO
K09298
homeobox protein HoxA/B/C/D13
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907699 (hoxc13b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105907699 (hoxc13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HoxA13_N
Homeodomain
Homeobox_KN
Homez
Motif
Other DBs
NCBI-GeneID:
105907699
NCBI-ProteinID:
XP_012691519
Ensembl:
ENSCHAG00000016293
UniProt:
A0A6P3W793
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All DBs
Position
5:11892001..11895840
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AA seq
307 aa
AA seq
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MTTSLVLHPCWADTLMYVYEKSPNENNPHKNQSMEGLSGNCPATHCRDLISHPALGRHSG
SIATHQGSVYPDLPSQDAGRQCPAPQTSSSASLGYGYPFGSPYYGCRLSHSHNVNLQQKP
CSYHPAEKYTEPSAALPTEELSSRAKEFAFYPSFASSYQTVPGYLDMSVVPGISTHPEPR
HETLIPMDGYQHWALSNGWDGQVYCSKEQTQSTHLWKSPFPDVVPLQPEVSSYRRGRKKR
VPYTKLQLKELEKEYAASKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKFICKSKT
NAHMHAT
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcgctggtcctgcatccatgctgggcggacaccttgatgtacgtgtatgaa
aaaagtccgaatgaaaataatccacataaaaaccaatccatggagggactaagcgggaat
tgccccgcgacccactgcagggatctcatctcgcacccggcacttggccgacactccggg
agcattgctacccaccagggctccgtgtaccccgacctaccctcgcaagacgccgggcga
cagtgccctgctccgcaaacttcgtcaagcgcctcgctgggctatggctatccattcgga
agcccatactacgggtgccgattgtctcactcgcacaatgtcaacctgcagcagaagcca
tgctcttatcaccctgccgaaaagtacacggagccgagcgcagcattgcccacagaggaa
ctctccagccgagccaaggagttcgccttttacccgagcttcgccagctcttaccaaact
gtcccgggttatttggacatgtcagttgtgccgggaatcagcacgcacccagagccgagg
catgaaactttgattcctatggacggttaccagcattgggctctgtcgaacggatgggat
ggccaggtgtattgttccaaggagcaaactcagtcgacccatctctggaagtctccattc
ccagacgtggtaccactacagcccgaggtcagtagctaccgtcgaggccgcaagaagcga
gtcccttacaccaaactccagctgaaggagttggagaaagagtacgcggccagcaagttc
attaccaaagacaaacgacggcggatctctgcaaccaccaacctgtctgagcgacaggtt
accatatggttccaaaaccgtcgcgtcaaagagaagaaattcatctgcaaatccaagaca
aatgcccacatgcatgccacctga
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