Clupea harengus (Atlantic herring): 105907704
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Entry
105907704 CDS
T09045
Symbol
hoxa1a
Name
(RefSeq) homeobox protein Hox-A1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907704 (hoxa1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105907704 (hoxa1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
PilZN
Motif
Other DBs
NCBI-GeneID:
105907704
NCBI-ProteinID:
XP_012691521
UniProt:
A0A6P3W8L0
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Position
19:24861851..24863344
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AA seq
326 aa
AA seq
DB search
MSTFLDYSVMSGGDGGGACSVRTFHADHGITTFQSCAVTVSNCLGEDRFLAGRTSPDTGP
VAHAQQPGSYQSPGSSLSIAYGTHAGYGTPGFCTNYNHYTLNQEVDTAVGLAQCAPIVYS
GNISSSVAQHHPHLSHRQGYSGGGAHLHGPLQFAAHSSCGHGQEQPSLALLTAGCSNALS
PLHASHHDACCPSLTESAFTAQTFDWMRVKRNPPKTGKVGEFGFSGQPNTVRTNFTTKQL
TELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGMLPKSPSNTG
NSPGKGDDGSERSLSTPSTPSPVSSS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcttagattattcagtaatgagtggaggagatggtggcggcgcgtgctcc
gtgagaacattccacgctgatcatggaattacaacttttcaatcctgtgctgttacggtg
agtaattgtctcggggaagatcgcttccttgcaggtagaacatctccggacacagggcct
gtggctcatgcacaacaacctggttcctatcagtctcccggtagctcattgagcatcgcg
tatggcacgcacgcaggctatggcacgccgggcttttgcacaaattacaaccattacacg
ctgaaccaggaagtagatacagctgttggtctagcacagtgcgcgcccatcgtttactcc
gggaacatatcttcatcagtggcacagcatcacccccacctctcgcatcggcaaggttac
agcggtggcggcgcacatctgcacggacccctccagttcgccgctcattcgtcgtgtggc
catggccaggaacagcccagcctagccctcctgacagcgggctgttcaaacgcattgtcg
cctttgcacgcaagccaccacgatgcctgttgcccctcactgacagaaagcgctttcacc
gcgcagacatttgactggatgagggtgaaacggaatccaccgaagacaggaaaagtagga
gaattcgggttcagtgggcagcccaataccgttcgtaccaatttcacgaccaaacagttg
acagagctcgagaaggagtttcacttcaacaagtaccttacacgtgcgaggcgagtagaa
atcgcagctgcactccagttgaacgagacccaggtgaagatctggttccagaaccggcgc
atgaagcaaaagaagcgcgagaaagagggcatgctccctaaatccccatccaacaccggg
aacagcccgggaaaaggagatgatggatcggaaaggtccctttctaccccatctacacca
tctcctgtgtcctccagttga
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