Clupea harengus (Atlantic herring): 105907761
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Entry
105907761 CDS
T09045
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105907761 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105907761 (usp24)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105907761 (usp24)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105907761 (usp24)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105907761 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
105907761
NCBI-ProteinID:
XP_031430067
Ensembl:
ENSCHAG00000027166
UniProt:
A0A6P8G3I5
LinkDB
All DBs
Position
10:complement(18010805..18077936)
Genome browser
AA seq
2627 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGSGPGGDSETTGRTGTGGFDPPPAYHDVVESERTSDENGNCSGGNMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLVASTCLAKLGLADADENCKRFIERCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERVKQDPIPVGLMGVLTMAFNPDNEYHFKNRMKTSQRN
WAEVFGEENMFAVSPTSSYQKEPHGWLVDLVNRFGEMEGFTAIQSKLNMEEIEIGSVSAL
VQPLSVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMR
FQRELVTVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEESTVSKTVKNAIDTDRLLD
WLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWRIQAGQSSTVIENIH
TIIAAAAVKFNFDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEV
LWELAHLPTLPTSLVQQALEEHLTILSDAYAVKETVKRNYIIKCIEDIKKIHLLEEPKSS
NETQVSFLTGSWGKKKPSSLAKSSQQSNPQAVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITSSLVSCHRLAVSVAGSNGLSGSTLVDGRYSYQEYLEAHLKFLAFF
LQEASLYLVWNRAKEVWECLVSGMDVCEMDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMESPDEEI
ANEAIQLIITYSYSNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFHGH
PVTLHVTYESTKDTFTLEAHSNETIGSIRWKIAEQLSCPVDNVQIFANDSMLTMNRDQKL
LNQLGFSDEQSLTVKSSGTGTPSGSSADSSASASSSSSGVFNSAYALEQEKSLPGVVMAL
VCNVFEMLYQLANLEEPRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTL
GSGSGSQASKSPSLSSKQQHQQSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSD
DEMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQ
TMPSILDEEMSRDGHDTLSSRPFRNAGRQGNRQLSLCGTPEKSSYRQMSMSDRSSIRVEE
IIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSSQPIKESTCSLFPMGVRSR
VSSTGSNCSSGSEGEATTLQAGICVKQLCVSIKDTIIAREALSLLVTCLQLRSQQLSSFY
NLLSVTDFIIDILLGSSSGEIRRVACDQLYTLSQTDASAYPELQKPNLFLLKVVLTAQLP
LWSPTSIMRGINQRLLSQCTEYFDLRCQLLDDLTTTEMEQLQISPAAMLEDEISWLDNFE
PTWTAELETSEADNILLAGHLRLIKTLLSLCGNEKEQLGSSLIQQLLDDFLFRASRIILN
SNNPTSSSAPSHDFHPKCSTVSSRLAAYEVLVMLADSSITNLQLITRELLSMHHQSDPSL
TKEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIEDDTENPEES
VFCQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELFVREQQDAYEFFTSLVDQLDEHLK
KIGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEV
LEGSNAYYCEKCKEKRTTVKRTCIKSLPNVLVIHLMRFGFDWESGRSIKYDEQIRFPWVL
NMEPYTVSGMARQDSSADHGENGRGGEASGGSSPRKKVTISENYELVGVVVHSGQAHAGH
YYSFIKDRRGCARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRR
YWNAYMLFYQRISDQNSPVLPKKSRVSVMRQEAEDLSLSAPSSPEISPQSSPRPPRANND
RLTLLTRLVRKGEKKGLFVEKMPAWIYQMVRDENLRFMKNRDVYNPDYFNFTLSLASVNA
TKLKHPSYQAMATGSLQLAVQFLLHTYLRTKKKLRSDTEEWIATVEVLLSKSSEACQWMV
QYLVGPEGREIIKICLLESSVREVRVVVANLLEKTLESALHFKDPGLDCLLDMLLSLLDK
DVPENCKNCSQYFSLFSTFAQRGCEPCQLLLKHAAYRRVLIFLLGPNRQNNQNRRWSSAQ
AREFLHLHNTLALVVLHTDLDSHRTDAPGVFKYTSPNCPSSSPLLPLHPDINTLLFKPEG
QPYLLEVMFAMRELSGPLSSLIDMITYCCFCNEPFSLGVLQLLKNQLETAPPHELKNVFQ
MLLEILMVEDPLQARRLKFAFESEKGLLALMHQSNSVDSSRCYQCVKFLITLAQKCAPAK
EYFKELSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLN
EKEQSGSSNGSDGSPANDNPDRSSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7884 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaagaggagcaacatatgacaacgcttctctgcatgggctttccggaccct
gttgctattaggaaagccctgcgtttagccaaaaatgacataaacgaggctgttgcgctc
ctcaccaacgaaagccccgggctcgggtatggatatgagccgatggaaagtgggcctgcg
cccgggtcggggcccggtggagacagcgagactactggtcgaactgggactggggggttt
gatcctccacctgcgtatcatgatgtcgtcgagagtgagaggacaagcgatgagaatggg
aactgctctggagggaacatggagttccccaccaccaacctgtacgagttggaaagtcga
gtgttcactgaccactggtccatcccctacaagcgtgaggagtcgttgggcaagtgcctt
gtcgcctccacatgcctggcaaaactggggctcgctgatgcagatgagaactgcaagagg
ttcattgagcgctgcatgcctgaggcctttaaaaagctgctgacctccagtgcggtgcat
aagtgggggacagagatccacgagggcatctacaacatgctgatgctgctggtggagctg
gtggcggagcgggtcaagcaggaccccatccccgtgggcctcatgggtgtgctcaccatg
gcctttaaccccgataacgagtaccacttcaagaaccgcatgaagaccagccagcgcaac
tgggccgaagtgtttggggaggaaaacatgttcgccgtctcccccacctccagctaccag
aaggagcctcatggctggctggtggacctggtgaatcggtttggtgagatggagggattc
actgctatccagagcaagctgaacatggaggagatcgagatcgggagtgtgtctgccctg
gtccagcccttgagtgtgtgtgctgagtatctcaactccagtctcgtccagcccatgctg
gaccctgtcattcacaagatgatcacctacgtgcagaatctggaggagaaagacctcaag
gataagcgtctggtcagcatcccggagctgctgtctgcgatcaagctgttgtgcatgcgc
ttccagcgggagctggtgactgtggtggacgacctgaggctggacatcctgctgaggatg
ctcaagactccacacttcagtgccaagatgaactcccttaaagaggtgaccaagctgatc
gaggagagcaccgtgtccaagacggtgaagaacgccatagacaccgaccggctgttggac
tggctggtggagaactccgtgctctcaatagccctcgaagggaatattgaccaggcgcag
tactgtgatcggataaagggaatcattgagctgttgggcagtaagctctctctggacgag
ttgtcgaagatctggagaatacaggctggccagtcatccacagtcattgaaaacatacac
accatcatcgctgcagcagctgtcaagtttaactttgaccagctcagccacctttttgtt
ctcattcagaagagctgggaggtagagagtgatcgtgtacggcagaagctgttgagtttg
atcgggaggatcggtcgagaggctcgctctgaggccactactggcaaggtgcttgaggtg
ctctgggagttggcccatctgcccactctccccaccagtctggtgcagcaggccttggag
gagcacctgaccatcctgagcgacgcctatgccgtcaaggagaccgtcaagaggaactac
atcatcaagtgcatcgaggacatcaagaagatacatttgctggaggaaccaaagtcttcc
aacgagacacaggtctcttttcttactggctcctggggcaagaagaaacccagctcactg
gccaaatcctcccagcagagcaaccctcaggcagtgtgggtggtgcccgctctgcgacag
ctccatgagatcacccgctccttcatcaagcagacctaccagaagcaggacaagagcatc
atccaggacctgaagaagaactttgagatcgtgaagctgatcacgagcagcctggtgtca
tgccatcgcctggccgtgtctgtcgccggctccaacggcctctcgggctccaccctcgta
gatggaagatactcctaccaggagtatctggaggcccacctgaagttcctggccttcttc
ctgcaggaggccagcctctacctggtgtggaaccgggccaaggaggtctgggagtgcctg
gtctccggcatggacgtgtgtgagatggaccgggagatgtgtttcgagtggttcaccaag
ggtcaacacgacctggagagtgacgtccagcagcagctgttcaaggagaagatcctcaaa
ctggagccttatgagattactatgaacggttttaacctctttaagaccttctttgagaat
gtgaacctctgcgaccatcgactgaagcggcagggaacccagctgtgcgtggagcggctg
gatttggccggtatggactttatctggcgcatcgccatggagtctcctgacgaggagatc
gccaacgaggccatccagctcatcatcacgtacagctacagcaacctcaaccccaagatg
aagaaggactctgtgtctttgcataagaagttcatcgcagattgttacaaaagattagag
gctgccagctctgccctggggggccccaccctcacccacgctgtcaccagggcaaccaaa
atgctgacggccaccgccatgccaactgttgccacatctgtgcaatccccttccaggtca
accaagctggtgattatagagaggctgttgttactggctgagagatatgtcattactata
gaggatttgtactcggttcctcggaccattctacctcacggtgcctcgttccacggccac
cccgtgaccctccacgtcacctacgaatctaccaaagacactttcacactggaggctcac
agcaacgagaccattggcagcatcaggtggaagattgcagagcagctgagctgtccggtc
gacaatgtccagatctttgccaatgacagcatgctgacaatgaaccgggaccagaagctg
ctgaaccagctgggcttctcggacgagcagagtctgacggtgaagagctcgggcacgggc
acgccctcaggcagctccgcagacagctccgcttcagccagcagcagcagcagtggcgtc
ttcaactcagcctacgccctcgagcaggagaagtccctgccaggggtggtgatggcactg
gtgtgtaacgtctttgagatgctctaccagctggccaacctggaggagccaaggatcacc
ctgcgcgtgaggaagctgctcctgctcatccccacagaccctgaggtgcaggacgccctc
gacaactttgtgccaaaagagtccagcgtctggagtcaccagaaaaccctgttcacgctg
ggctcgggctcgggctcccaggcctccaagtctccgtctctgtccagcaagcagcagcac
cagcagagcgccgcctccatcctcgagtccctcttccgctcttccgccccgggcatgtcc
accttcagggtgctctacaacctggaggtgttgagctcaaagctgatgcccacgtctgac
gatgagatggcaaagaccagcgtgaagtctttctgtgagaacttcctcaaagcaggaggc
ctgagcctggtggtgaacgtcatgcagagagactccattccctcagaggtggactacgag
accagacagggcgtctactccatatgtctgcagttggccaggttcctgctggtagggcag
accatgcccagcatcctggacgaggagatgagtagggacggccatgacacgctttcgtcg
cggcccttccgtaacgcggggcgacagggcaaccggcagctgtctctatgtgggacaccc
gagaagtcgtcctaccggcagatgagcatgtccgaccgctcgtccatccgtgtggaggag
atcatccctgctgcacgcgtggccatccagactatggaggtgggggacttcacctccaca
gtggcctgcttcatgcgcctcacctgggcggctgctgccggccgattggacctggtgggg
agcagccagccaatcaaagaaagcacctgctccctcttccccatgggggtgcgcagtagg
gtcagcagcacaggcagtaactgcagctctggcagtgagggcgaggccaccacactgcag
gcgggcatctgtgtgaagcagctgtgtgtgtccatcaaagacacaatcatcgcccgcgag
gccctttctctgcttgtcacctgcctccagctgcgctcccagcaactatcctctttttat
aacttgctaagtgtgacggatttcatcatagacatcctgctggggtcttccagtggagag
atccggcgtgtggcctgtgaccagctgtacactctgagccagacggacgcgtcggcctac
cccgagctgcagaagcccaacctgttcctgctgaaggtggtgctgaccgcccagctgccc
ctctggtcccccaccagcatcatgaggggcatcaaccagaggttgctgtctcagtgcact
gagtattttgacctgcgatgccaactcctggatgacctgaccaccacagagatggagcag
cttcagatcagcccggcggccatgctggaggacgagatcagctggctggacaactttgag
cccacatggacggcggagctggagaccagcgaggccgacaacatcctgctggccggacac
ctccgcctcatcaagacgctgctctcgctctgtggcaacgagaaggagcagctgggctcc
tccctcatccagcagctgctggacgacttcctgttccgagcgtcccgcatcatcctgaac
agcaacaaccccaccagctcctccgcccccagccatgacttccacccaaagtgcagcacg
gtgagcagtcggctggcggcgtacgaggtgctggtgatgctggccgacagctccatcacc
aacctgcagctcatcacccgcgagctgctctccatgcaccaccagtccgacccctcactc
accaaggagttcgattacctgcctcctgtggagagtcgctctgtgtcgggcttcgtgggc
ctgaagaacggcggggccacctgctacatgaacgccgtcttccagcagctctacatgcag
cctggcctgccggaggcgttcttgtcaatcgaggatgacacagagaacccggaggagagt
gtgttctgtcaggtccagtctctctttggacacctgatggagagcaaactgcagtactac
gttcctgaaaacttctggaagatctttaagatgtggaataaggagctctttgtgcgagaa
cagcaggacgcctacgagttcttcaccagtctggtggaccagctggacgagcacctgaag
aaaattggacgagagcagatcttcaagaacaccttccagggcattttctctgaccagaag
atctgcaaagactgcccccacaggtatgagcgggaggagacgttcatggcgctgaacctg
ggtgtgacgtcctgccagagcctggagatctctctggaccagttcgtcaggggggaggtg
ctggagggcagcaacgcctactactgcgagaagtgcaaagagaagagaaccacggtgaag
cgcacctgcattaaatccctgcccaacgtgctggtcatccacctgatgcgcttcggcttc
gactgggagagtgggcgctccatcaagtacgacgagcagatccggttcccttgggtgttg
aacatggagccgtacaccgtgtccggcatggcccggcaggactccagcgcggaccacggc
gagaacggccgcggtggcgaggcctcaggcggctcgtctccgcggaagaaggtcaccatc
tcggagaactacgagctggtgggcgtggtggtgcacagcggtcaggcccacgccggccac
tactactctttcatcaaggaccgccggggctgtgctcgaggtcgctggtacaagttcaac
gataacgtggtggaggagtttgacatgaatgacgagaccctggagtacgagtgctttgga
ggggagtaccggcccaaagtgtatgaccagtctaacccgtacccggacgtgcgcaggcgc
tactggaacgcctacatgctcttctaccagcgcatctcggaccagaactccccggtcctg
cccaagaagagcagagtcagcgtcatgagacaggaagccgaggacctctccctgtcggcc
ccctcgtcccccgagatctctccccagtcctccccacggccccccagggccaacaacgac
cgcctgaccctcctgactcgcctggtgaggaagggagagaagaagggactgtttgtggag
aagatgcccgcttggatctaccagatggtgagggatgagaacctgaggttcatgaagaac
cgagacgtctacaaccccgactacttcaacttcaccctgtccctggcctccgtcaacgcc
accaagctgaaacacccttcataccaggccatggcgacgggcagcctgcagctggcggtc
cagttcctcctccacacctacctgcgcaccaagaagaaactcaggtcggacacggaggag
tggatcgccacggtggaggtgctgctgtccaagagcagcgaggcgtgccagtggatggtg
cagtacctggtggggccagagggccgggagatcatcaagatctgcctgctggagagcagt
gtgcgtgaggtgcgtgtggtggtggccaacctcctggagaagacgctggagagcgccctg
cacttcaaggacccaggcctggactgcctgctggacatgctgctctccctcctggacaag
gacgtgccggagaactgcaagaactgctcccagtacttctccctcttcagcacctttgcc
caaaggggctgtgaaccctgtcagctgctgctaaaacatgctgcctaccggcgtgtgctc
atcttcctgcttggacccaaccgccagaacaaccagaaccggcgctggagttcggcccag
gcccgcgagttcctgcacctgcacaacacactcgccctggtggtgctgcacacggacctg
gactcccacagaaccgacgcgccaggtgtgtttaagtatacctcgcccaattgccccagt
tcttcccccctcctccccctccacccagacatcaacactctactcttcaaacctgaggga
caaccgtacctgttggaggtgatgtttgccatgcgggagctgtccggtcccctgtcctcc
ctcatcgatatgatcacatattgctgcttctgcaatgagcctttctctctgggcgtgctg
cagcttctcaagaaccagctggagacggcccctcctcacgagctcaagaatgtcttccag
atgcttctggagatcctgatggtggaggatcctttacaggcccgaagactgaagtttgca
ttcgagtctgagaaagggctgctggcgctgatgcatcagagcaacagcgtggacagcagc
cgctgctaccagtgtgtcaagttcctgattactctggcccagaagtgtgctcctgcaaaa
gaatatttcaaggagctgtcaggtcactggagctgggcggtccagtggctgcagaaaaag
atgtctgagcactactggacccctcagagtaacgtctccaacgagacctccactgccaaa
accttccagcgcaccatttctgcacaggacacgctggcctacgccacggcactcctgaat
gagaaggagcagtcgggcagcagtaatggctccgatggcagcccagccaatgacaacccg
gaccgaagcagcctcagacagggctcggagtctcctatgatgttgggtgactcgaagagt
gatttagaggatgtcgacccctaa
DBGET
integrated database retrieval system
