Clupea harengus (Atlantic herring): 105907763
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Entry
105907763 CDS
T09045
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K17848
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04068
FoxO signaling pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
105907763
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105907763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105907763
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
105907763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
PH_6
Ank_5
SpoIVA_ATPase
WHD_Cdc6
SOS1_NGEF_PH
PH_4
Motif
Other DBs
NCBI-GeneID:
105907763
NCBI-ProteinID:
XP_031423605
Ensembl:
ENSCHAG00000017332
UniProt:
A0A6P8FJ62
LinkDB
All DBs
Position
5:complement(12231372..12256829)
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AA seq
1263 aa
AA seq
DB search
MSQSGTLQRRTTYLISLTLVKVEAVGAEGDGCSPEKKAATLALPPSPSPLPGPGQDLRGQ
DREDDDDDDDDEEVEEEDEVVAAASRSVEERVPQPEKQEVEEPEKEKKEGRASWAVREKR
RPESSDGRPPRTPVPKPRDQTVSLVPVKDKAGMELMGSPGMTLERDRERREDTPKMDLYR
EVFPPPHRGVPEWIDQGSNGTPSRAALSGRTGQRPEALLRSHVAITTVSRRELREASQSV
PPSAKSLDRKARERSPPTTITMTMGPYRASWSESEGRGMFQRMTGVSVGGVGGIGVSGAP
TMARESPRSDRLKTASTSLPAPATQVQPAKPQRKGKSRTLDNSDLHSLSEDLRRGKEAQR
GGGGAGGASQAQGQAQAPARDRKMLKFISGIFTKSSPAPPTAATLPPTPTPLYSSVQRGS
SEEDAACANSQEWILSRTIQELRLGVLGSLQSGKSALVHRYMTGSYLPLECPEGGRFKKE
MLVDGQSHLLLIREEPGLPDAQFCSWVDGVILVFSLENEASFQEVYNNYSELCAHRNVAD
VPFIVVGTQDKISSTNPRVIEDARARQLCSDVRRCSYFETCATYGLNVNRVFTEAAQKIW
AVKRQAALFASCKSLPNSPSHSGGSTPVSGAFPGQASNGGQSSDYSSSLPSTPVISHKEI
GVSGAEKLGSATPGTLRSGPRRRTPRFPGRRGSDERRSVDSKCDFGSGRAIPIKQSVLLK
RSGSSINKEWKKKYVTLSSDGVLSYHSSVNEYMQNVHGKEMDLLRVTVKVPGKRPPRAIP
SGAPPAGQNGLVKDTPGPEGSGAVPTYPSGLLTVDEGPGVIGGLTLGNRGVQRNPSTLSS
KTQSMDSSVEGVSSPTSSKDPAPSSPMIDRKKTRRKKSMNQKGDTASGQAEAKRKMWKLK
SFGSLRNINKTDEDNYDFMVVSSTGQMWHFEAPSPEERDAWVQAIESQILASLQSCESSR
NKTRRNSQSEAVALQAIRNAKGNSFCVDCDAPNPTWASLNLGALICIECSGIHRNLGTHL
SRVRSLDLDDWPHELTLVLSAIGNHLANSIWEACTQGCHKPTPDATREEREPWIRAKYEQ
RMFVAPLPCTGEGLDGSLSANLLRAVTDRDLPRLLLLLAHSSKEEINTPVDVAMHPGNSA
TQQPRPALHVACQLADVVMTQLLVWYGSDVRCRDPQGLTALSLARRAGSQECADILLQYG
CPNESTTPCTSPTGASLGSPCSSVPLPGGSGGGGGGATTPTPTLSRKTSAASLSRSSSRR
AVS
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcagggaccctgcagcgacgcaccacctacctaatctccctcacgctcgtc
aaggtcgaggccgtcggggccgagggggatggatgttctccggagaagaaggccgcgacc
ctggctctgcccccctccccgagcccccttcccgggccaggacaggacctgagggggcag
gacagggaagacgacgacgacgacgacgacgatgaggaggtagaagaggaagacgaggtg
gtggcggcggctagcaggagcgtggaggaacgtgtgccgcagccagagaagcaggaagtg
gaggagccggagaaggagaagaaagaggggagggccagctgggcggtgagggagaaaagg
aggcctgagagcagcgacggtcgtcctcccagaacgcccgtcccaaaaccgcgcgaccaa
accgtgtcactggtgcctgttaaagacaaggcgggcatggagctgatgggaagcccaggg
atgaccctggagcgcgatcgggaacgccgggaagatacccccaaaatggacctctacagg
gaggtcttcccaccaccccatcgtggcgttcctgaatggatcgaccagggctccaacggc
actccaagccgggccgctctgtcgggccggaccggccagcgaccggaagcgctgctgcgc
tcgcacgtggccatcaccacggtgagccggcgggagctgcgcgaggccagccagagtgtg
cccccgtccgccaagagcctggaccgcaaggcccgcgagcgctcgccccccaccaccatc
accatgacgatggggccctaccgcgcctcctggtccgagagcgagggccgtgggatgttc
cagcgcatgactggagtcagcgtgggcggcgtgggtgggatcggcgtctccggcgcgccg
acgatggctcgcgagagcccgcgctcggaccggctgaagaccgcctccacctcgctgccg
gcccccgccacacaggtgcagcccgccaagccgcagcgcaagggcaagagccgcacgctg
gacaacagcgacctgcactcgctgtccgaggacctgcggcggggcaaggaggcccagagg
ggtggcggtggcgccgggggggcgtctcaggcgcagggtcaagcccaggcgccggcccgc
gaccgcaagatgctcaagttcatcagcggcatcttcaccaagagctcaccggcgccccct
acagccgccacgctgcctcccacgcccacgcccctctacagctccgtgcagagggggtcc
agcgaggaggacgcagcgtgtgccaacagccaggagtggattttgagtcgtaccatccaa
gagctccgtctgggggttctgggaagtctgcagagcgggaagtcagcgttggtgcaccgc
tacatgaccgggagctacctgcctctggagtgccctgaggggggccggtttaaaaaggag
atgctggtggacggacagagtcacctgctgctcattagagaagaaccaggcctgccagac
gctcaattctgtagctgggtagacggtgtgatcctggtcttcagcctggagaacgaggcc
agcttccaggaggtctacaacaactacagcgagctgtgcgcacaccgcaatgtagcagat
gtccccttcattgtagtgggcactcaagataagatcagcagcacaaacccgcgggttata
gaggacgccagggcccgtcagctctgttccgacgtcaggcgctgctcctacttcgagacg
tgcgccacctacgggctgaacgtcaaccgcgtcttcaccgaagctgctcagaagatttgg
gcggtgaagaggcaggctgctctgtttgcatcctgtaaatccctccccaactcccccagt
cactccggcggatcgaccccagtgtcaggagccttccctgggcaggccagtaatgggggc
cagagcagtgactactcctcctccttgccctctactccggttatcagtcataaggagatc
ggcgtgtcgggagcagagaagttgggcagcgccaccccagggacgctcaggagcggcccg
cgacgccgcacgccccgattcccaggtcgccgtggcagtgatgagagaaggagtgttgat
agtaaatgtgattttggcagtggaagggctatccccatcaaacagagtgtcctactgaaa
cgcagtggaagctcaatcaacaaggaatggaagaagaagtacgtcactctgtccagcgat
ggtgtgctgtcctaccactccagtgtcaatgagtacatgcagaacgtccacgggaaggag
atggacctgctgcgggtgacggtgaaggttccagggaagcgtccacctcgagcaatcccg
tctggggctccccctgctggccagaacggtctggtgaaggacaccccaggaccagaggga
tcaggagcagtgcctacatatcccagcggtctcttgactgtggatgaggggccaggggtg
ataggcggactgaccctgggcaaccgaggggtacagcgcaacccctccacgctctccagt
aagactcagagtatggactcctccgtagagggcgtgtccagcccgacctccagcaaagat
cccgccccttcctccccgatgattgacaggaagaagacgaggaggaagaagagcatgaat
cagaaaggagacacagcatcagggcaagctgaggccaagcgcaaaatgtggaagctaaaa
agctttggtagcttgagaaacataaataagacagatgaggacaactatgacttcatggtg
gtgtcgagcacagggcagatgtggcatttcgaggcccccagcccggaggagcgcgacgcc
tgggtccaggccatcgagagccagatcctggccagcctgcagtcctgtgagagcagcagg
aacaagactcggaggaacagccagagtgaagcggtggcacttcaggccattcgtaatgcc
aaaggcaacagcttctgtgttgactgtgatgcaccaaatcccacgtgggcgagcctgaac
ctgggcgccctcatctgcatcgagtgctcgggcatccaccgcaacctgggcacacacctg
tcccgcgtgcgctccctggacctggacgactggccgcacgagctcacactggtgctcagc
gccatcggcaaccacctggccaatagcatctgggaggcgtgcacacagggctgccacaag
cccacgcctgatgccacgcgggaggagcgggagccatggatacgggccaaatacgagcag
cgcatgtttgtggcgccactgccgtgcaccggcgagggattagacggctcgctgtcggcc
aatctcctgcgggcggtgacggacagggacctgccacgcctgctcctgctgctcgcccac
agctccaaggaggagatcaacaccccggttgacgtggcgatgcaccctggcaacagcgcc
acccagcagccgcgccccgcccttcacgtcgcatgtcagcttgcagacgtcgtcatgacg
cagctgcttgtttggtatggcagtgacgtgaggtgtcgtgaccctcagggcctgacggcc
ttgtctctggcacgccgtgccggtagccaggagtgtgccgacatactgctgcagtacggc
tgccccaacgagagcaccacaccctgcaccagccccaccggcgcctccctgggctccccc
tgctcgtctgtccccctccccggtggcagcggcggtggtggtggtggtgccaccaccccc
acccccaccctctcacgcaagaccagcgcagccagcctgagtcggagcagctccagaaga
gctgtgtcctaa
DBGET
integrated database retrieval system
