Clupea harengus (Atlantic herring): 105907814
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Entry
105907814 CDS
T09045
Symbol
smpd2b
Name
(RefSeq) sphingomyelin phosphodiesterase 2
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105907814 (smpd2b)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
105907814 (smpd2b)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
MFS_1
DUF6755
Exo_endo_phos_2
FixQ
Motif
Other DBs
NCBI-GeneID:
105907814
NCBI-ProteinID:
XP_031423631
Ensembl:
ENSCHAG00000003372
UniProt:
A0A6P8FKD3
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Position
5:13263372..13279498
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AA seq
440 aa
AA seq
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MATSKSMHLRVFSLNCWGIRYVSKHCVERFKMIGDLLSREDYDIVLLQEVWSEKDVLYLK
KTLSYTHPYSHHFKSGVIGSGLAVFSKYRIHDAFLYRFSVNGYPYKVQHGDWFGGKAVGM
VQMKIGGLMAHIYVTHLHAEYCREKDAYLPHRVVQAWELQHFIRHTSRGADLVILGGDFN
MHPQDLGCRLLRTSTGLRDCYTETDKFDGCENGHTLIANNPFINEKELRPFEKGIRIDYI
LFKGSKRVEMKCESLSTTQGSYPGRAFPLSDHEALSAHLLLVPSDPASQQGEPESGKENT
GKLAELVDLVTEARTEVKVGVHCAQQKRYSAARTGGMGLALLLLELAIAAVPWLATAAAQ
HPFPRASFYLLGALCFCLLLCAVVLWLFHSTELKALQSADDHMRLAAASLQEELRGAKTP
PPQHAHGENPTNQDACSKED
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagcaagtctatgcatctgcgggtcttctccctcaactgctggggtatccgt
tatgtcagtaagcactgtgtggagcgtttcaaaatgattggagatctgctgagcagagag
gactatgacattgtccttcttcaggaggtttggagtgagaaagatgtcctctacctgaag
aaaactctctcctatacccatccatactcccatcatttcaaaagtggagtcataggcagt
gggctggccgtcttctccaagtaccgcatccatgatgcatttctgtaccgcttctctgtg
aatggatacccctacaaggtccaacatggagactggttcggagggaaggctgttggaatg
gtacagatgaagatcggtgggttgatggcccatatctacgtcacacatcttcatgcagag
tactgcagggagaaggatgcctatctgccccatcgagtcgttcaggcctgggaactgcag
cacttcatccggcacacctccagaggggccgacctggtcatcctggggggcgacttcaac
atgcacccccaggacctgggctgccgtctgctgcggacctccaccggcctgagggactgc
tacacggagacggacaaatttgacggctgtgagaatggacacactctcatagccaacaac
cccttcatcaatgagaaagagctgcgcccttttgagaagggcattcgcatcgactacatt
ctgtttaaggggtccaagcgtgtagagatgaagtgtgagtctctgagcactacccagggg
tcgtatccgggtcgggccttccccctgtcggaccacgaggccctgagtgcccatctcctg
ctggtgccctcggacccggccagccagcagggggagccagagagcggcaaggagaacaca
ggtaagctggcggagctagtggacctggtgacggaggcgcgtacagaggtgaaggtgggg
gtgcactgcgcccagcagaagcgctacagcgcggcgcgcaccggcggaatggggctggcg
ctgctgctgctggagctggccatcgcagcggtgccctggctggccacggcggccgcgcag
caccccttcccgcgcgcctccttctacctgctgggggccctgtgcttctgcctgctgctg
tgcgccgtggtgctgtggctcttccacagcaccgagctcaaggccctgcagagcgccgac
gaccacatgaggctcgccgccgccagcctgcaggaggagctccggggggcgaagacgccg
cccccacaacacgcccacggggaaaaccccaccaatcaggacgcctgcagtaaggaggac
taa
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