Clupea harengus (Atlantic herring): 105907817
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Entry
105907817 CDS
T09045
Symbol
paf1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105907817 (paf1)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105907817 (paf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
105907817
NCBI-ProteinID:
XP_012691657
Ensembl:
ENSCHAG00000015847
UniProt:
A0A6P3W7V0
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All DBs
Position
9:12524625..12530955
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AA seq
527 aa
AA seq
DB search
MAPTIQTQAQREDGHRTSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFVQ
YKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRVDPNILLDPADEKLLEEDITAPTSSKR
SQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAIE
KTFEDAQKTVTAHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPAGVDM
MSQAMIRGMMDEEGNQFVAYFLPNEETMRKRKRDVEEDIDYMPEELYEYKIAREYNWNVK
NKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAMLVCNHRDMNDKE
LEAQDARKAQLENHEPEDEEDMDKVHESDKEKGSESENSESESEHEEEERPEPEEEDEEV
EVEKPPRRRRASGSGSESGDERQARETRADEEEIFGSDDDSDDDGEAKGGSRGGGRSSGS
EEEEEEDGGGRRSGSASPVRSSSDHSEAGQQSGSDQGSDSSDASDSE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctccaacgatccaaacacaagctcaacgtgaagacgggcacaggacctcttcacac
agaaccgtccctgagaggtctggtgttgtgtgtcgagtgaagtactgcaacagcctccct
gacataccctttgacccaaagttcatcacgtacccatttgatcagcacaggtttgtgcaa
tacaaagctacttcgctagagaaacaacacaagcatgatctgttgactgaacctgacctg
ggcgttacaattgacctcattaacccagacacctatcgtgtagatcctaacattttactt
gatccagcggatgagaaacttctagaagaggacatcacggctcctacaagttccaaaaga
tctcagcagcatgccaaagtggtaccctggatgagaaagacagagtacatctccacagag
ttcaacagatacggtgtttccaatgagaaagtggaagtcaagattggtgtttctgtcaag
cagcagttcacagaggaagagatctacaaagacagagacagtcagattgccgccattgaa
aagacatttgaagatgctcagaaaactgtcacagcgcactacagcaaacccagagtcact
ccagtggaggttatgccagtcttccctgactttaagatgtggataaacccatgtgctcag
gtcatctttgactcggaccctgctcccaaagacatgtctgcccctgctggtgtagatatg
atgtctcaggccatgatcaggggtatgatggacgaggaaggaaaccagtttgtggcgtac
ttcctgcccaacgaggaaaccatgcgcaagcgcaagagagatgttgaggaggatattgac
tacatgccagaagaattgtatgaatacaagattgccagggagtacaactggaacgtgaag
aacaaggccagcaagggctatgaggagaactacttcttcatctttagagatggagatggg
gtctactacaacgagctggagaccagagtgcgtctcagcaagagaagagccaaggctgga
gcgcagtccaccaccaatgcgatgttggtgtgcaatcacagagatatgaacgacaaggag
ctggaagcacaggatgcccgcaaagctcagctggagaatcacgagcccgaggatgaggag
gacatggacaaggtccatgagtctgacaaagagaagggcagcgagagcgagaactctgag
agcgagtcagagcacgaggaggaggagcgtcccgagcccgaggaagaggacgaagaagtg
gaggttgagaaaccaccgcggcggcggcgggcgagcggcagtggcagcgagagcggcgac
gagcggcaggcacgggagacgcgtgccgacgaggaggagatctttgggagtgacgacgac
agcgacgacgacggcgaggccaagggaggcagcaggggcggggggcgcagcagcggcagc
gaagaggaggaggaggaagatggcggagggagaaggagtgggagtgcgtcacctgtgcgc
agcagcagcgatcactcggaggccggccagcagagtggaagcgaccaaggctccgactcc
agcgacgccagcgacagtgaatga
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