Clupea harengus (Atlantic herring): 105907953
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Entry
105907953 CDS
T09045
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907953 (hoxd3a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105907953 (hoxd3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
DUF7255
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105907953
NCBI-ProteinID:
XP_012691811
Ensembl:
ENSCHAG00000026497
UniProt:
A0A6P3W902
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All DBs
Position
2:complement(26876449..26898177)
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AA seq
395 aa
AA seq
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MQKATYYDNTGLFGGYSYPKSDSYSYGTSHQPYPTSNMENEYQGPICPLQTSSARPPAHK
TSDLNGSCMRPSGSQSTSQPESIVEQPQAPPLAASSPNSNSTTSQKKKSPTNNASSTANP
VTTKQIFPWMKESRQNSKKGNSVGTAGETCDDKSPPGPASKRVRTAYTSAQLVELEKEFH
FNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPMGHSPDRSPPLS
GPNHIGYSGVLPNVNNLTYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQQKRYPSTDYE
HHSMQGNGSFASANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAAQIPG
NHHHGPCDPHPTYTDLTSHHASQGRIQEAPKLTHL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagccacatactatgacaatactggactgtttggaggctactcgtaccccaag
tctgactcctacagctatggcacatctcaccagccttaccccacgtctaacatggaaaat
gaatatcagggtccaatctgtcccctgcaaacatcatctgcccggccacctgcccataaa
actagtgatctaaatggcagctgcatgagaccaagtggcagtcagagcaccagccaacca
gaaagtattgttgaacagccccaagcacctcctttggctgcctcttcacccaactccaac
agcactacatctcagaaaaagaaatctcccaccaacaatgcctccagcactgccaaccct
gtcactacaaagcagatatttccatggatgaaggagagcaggcagaactcgaagaagggc
aacagtgttggaacagcaggtgaaacctgtgatgataagagtccaccaggaccagcctcc
aaacgggtgcgcactgcctacacaagtgcccaactggtcgagcttgagaaggagttccat
ttcaaccggtatctttgtcgtccccgaagagtggagatggctaatttattgaatctaact
gagcgccaaataaagatctggtttcaaaacaggaggatgaagtacaaaaaggatcagaaa
gccaaggggataatgcactctcccatgggacattctccggacagaagcccaccgttaagt
gggccgaatcatattggatattctggtgtgctcccaaatgtaaacaatctcacctatgat
gcgccttcacctccgtcattcgctaagccacaacaaaacatgtacggcctggctgcgtac
acggcaccattgggtggttgcataccgcaacagaaaaggtatcctagcacagattatgaa
caccacagcatgcaaggcaacggaagctttgccagcgctaatttacaaggcagtccagtg
tacgttgggggaaatttcgttgattccatgccagcttcgggccccatgttcaacctcggc
catctcccccatccttcatctgccagtgtggactacagctgtgccgctcagattccaggc
aaccaccaccatggaccctgtgacccccatcccacatacacagacctcacctctcaccat
gcgtctcagggacggattcaggaagcgcctaaactaacgcatttgtaa
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