Clupea harengus (Atlantic herring): 105907954
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Entry
105907954 CDS
T09045
Symbol
hoxd4a
Name
(RefSeq) homeobox protein Hox-D4a
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907954 (hoxd4a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105907954 (hoxd4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
DUF2209
Motif
Other DBs
NCBI-GeneID:
105907954
NCBI-ProteinID:
XP_012691813
Ensembl:
ENSCHAG00000026499
UniProt:
A0A6P3W7U7
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All DBs
Position
2:complement(26889664..26891151)
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AA seq
255 aa
AA seq
DB search
MEGGKKDNSRKISIFYLQKLMAMSSYMVNSKYVDPKFPPCEEYSQNSYIPDQGTGYYSPS
QDTDFQHPGIYPRSNYSEQPFNCNTVQGSTVQPRGHVQEQASHPSPFTAQTEQCPSVQVP
GPRTCGQQNTKNQNGIQAKQPAIVYPWMKKVHIANVNPDYTGPEPKRSRTAYTRQQVLEL
EKEFHFNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHKLPNTKGRSASASNQH
VQHVQKDNQTDITTL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggaaaaaaagacaactcgagaaaaattagtattttctaccttcagaaatta
atggccatgagttcgtacatggtgaactccaagtatgtggatcctaaatttcctccttgt
gaggaatattcgcaaaacagctatatacctgaccagggcacagggtactacagtccatcg
caggacactgatttccagcatccaggaatctatccacggtcaaactactcggagcagcct
ttcaattgtaacactgtgcagggctccacagtgcaaccgcggggtcatgtgcaggagcaa
gctagccatccgagccctttcaccgcccagaccgagcagtgtccctcggtccaagtacct
ggcccgaggacttgtgggcagcaaaacacaaagaaccaaaacgggatacaagccaagcag
ccagcaatagtttacccctggatgaagaaagtgcacattgcaaatgtgaatccggattac
acaggaccagaacccaaacggtcacggacagcctacacaagacagcaggttttagagctg
gaaaaggaattccattttaacaggtatctgaccagacggcgtcgcattgagattgcccat
acgctcgttctttccgagcgccagatcaaaatctggtttcagaacagaagaatgaaatgg
aaaaaagatcacaaactgcccaacacaaaaggaagatctgcgtcggcctcaaaccagcat
gtacagcacgttcagaaggacaaccagacagatatcacaactttataa
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