Clupea harengus (Atlantic herring): 105907971
Help
Entry
105907971 CDS
T09045
Symbol
ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105907971 (ttc21b)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
105907971 (ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_8
TPR_1
TPR_7
TPR_12
ANAPC3
TPR_CcmH_CycH
CFAP70_TPR_C
TPR_11
TPR_6
CFAP70_mid_TPR
TPR_15
RMD1-3
TPR_21
PknG_TPR
TPR_Slam
TPR_9
TPR_Psidin_N
FAT
Motif
Other DBs
NCBI-GeneID:
105907971
NCBI-ProteinID:
XP_012691834
Ensembl:
ENSCHAG00000027838
UniProt:
A0A6P3W860
LinkDB
All DBs
Position
2:25825046..25839976
Genome browser
AA seq
1319 aa
AA seq
DB search
MTDIQDEETALASILYYCQEKYSNNVIGVASEAQTKFSGNPIFAFFHAYGILLQDQVQDA
IQEFEQISDKRDVSLCSVMALVYAHKKKPNPDQDVIQEFDARVKEDRKSASPKALYNAAM
FLWLLGRNDKAREYIDRMIKISNGSKEGIILKGWIDLTSDKDAYAKKSGKYFDEGLKENG
SILALMGKVQYYEFRQNYSGALEMVSHVIVSFPGFLPAFVKKMQLFLTLQNWEQTIDEAQ
RLLQRDKDNLEALRMLALHSLCREGDISETVNHLSNLVHNLNIQEPHNPELYYRMSLAFT
RLCGRAEPILQQTNSMVERAFAHAPRDSDLATEMGYQQVLQGRIKEAMKWYKTAMTLDET
SVSALMGIIRCQLLEGHLDDAEQQLEFLTEIQQSIGKSGELLYLRAVLAVKRRKPQDEVT
NLLNDAVDTHFSTLQGLPLGVEYFQRLNPDLLLEIAVEYLALCPAKPPAQGQPPAPQLQH
CASVLDTVVKIVPGLLQAIYLMAKVRFLSGDIEAAQSSLQHCLELSPSHAEAHLLMAQIH
LLHGSFKLSSQSLELCLSHNFEIREHPMYHLIKAQAQRKQGELQEAIKTLQMAMSLPGVR
RVGSHKGKGRKVELGTADCVSIFLELAEALWMNGEQHEAAKVMQDTINEFTGTPEELRVT
IANADLALLRGDTELALSMLRNITPEQPYYIQAKEKMADIYLNHRKEKRLYVSCYRELVE
KMPSPHTYLLLGDAYMDIQEPEKAIEVYELALKKNPKDGALASKIGKALVKTHNYAKAIN
YYEAALRSGQQNFLRYDLAELLLKLRQYERCEKVLHEALTHDAVNELSALSEDCRYLVLL
AKVQSKVAKNNEAILSLQRARDVQAKVLKRVQLEQPDAVPLQKQLAAEICAEIGKHYSSQ
RGYERAVKFYKEALVYCESDSKVMLELARLYLTLDDMESCQQQCSVLLKSDQVNESATLM
MADLMFRKQDYDQAIFHFQQLLERKPDNYPTLSRLIDLLRRAGKLDEVPRFLDMAEKHSP
RAKFDSGFNYCKGLYLWYTGEPNDGLRHFNKARKDNEWGQNAVYNMIEICLNPDNETVGG
EVFENLDGDIGNSTEKQESEQLAVRTAEKLLKELRPQTAEGHIQLRILEHYCFLATKQTA
NVERALSVFTEIANNEKDHVPALLAMATAYMILKQTPRARNQLKRIAKMNWNIVDADEFE
KSWLLLADIYIQSGKYDMAGELLKRCLRHNKSCCKAYEYMGYIMEKEKAFRDAALNYEMA
WKYGNQTNPTIGYKLAFNYLKAKRYVDAIDVCHKVLDAHPNYPKIRKDILDKARASLRS
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatacaggatgaagaaacagccctggcctcaattctgtattattgccaggaa
aagtattcaaataatgtcattggagttgcaagtgaagctcagacgaaatttagcggcaat
cctatatttgcatttttccatgcctatggtattcttctgcaagaccaagtccaagatgcc
attcaggaatttgagcaaataagtgacaaacgtgatgtatctctctgctccgtcatggca
cttgtgtatgctcacaagaagaaaccgaatccagatcaagatgttatccaggagttcgac
gcaagagttaaggaggatcgcaagagtgcaagccctaaggctttgtacaatgcagcgatg
ttcctctggcttttgggtcggaacgataaagcaagggaatacattgatagaatgataaag
atctccaatggttctaaagagggaattatcctgaaaggatggatagacctcacatctgat
aaggacgcttatgccaagaagtctgggaagtacttcgatgagggcttgaaagagaatggc
agtattctggctctgatgggaaaggttcagtactatgagtttcgccaaaactactcagga
gccttagagatggtcagccacgtcattgttagtttccctggcttccttccagcttttgtg
aagaagatgcagctgtttctgaccttgcagaattgggagcagactattgatgaagctcag
aggcttttgcaaagagacaaagacaacctggaggccctgagaatgctggcacttcattcc
ctgtgcagagagggagacatcagtgagacagtcaatcacctctcaaaccttgtccataac
ctgaacatccaggagcctcacaacccagagctttattacaggatgtctcttgccttcacc
cgactgtgtggaagagctgagccgatcctccagcagacaaactccatggtggagcgggcc
ttcgcccatgcacccagggactccgaccttgctacggagatgggctatcagcaagtcctg
cagggtcgcataaaggaggccatgaagtggtacaagacggccatgacgctggatgagacc
agtgtgtcagctttgatgggtattattaggtgtcagctcctggagggccatctggatgac
gccgagcagcagctggagttcctcactgagatccagcagtccattggcaaatcaggggag
ctattgtatctgcgtgcagtgctggccgtgaagcgccggaagccccaggacgaggtgacc
aacctgctgaacgatgcggtggatacccacttctccaccctgcaggggctgccgctcgga
gtggagtacttccagcgcctcaaccccgacctgctcctggagattgctgtcgagtacctg
gcactctgtcctgctaagcctccagcccaggggcagcctccagctccacagcttcagcac
tgtgcttccgtccttgacacggtggtaaagatcgtccctggcctcctccaggccatatat
ctcatggccaaggtcaggtttctgtcaggtgacattgaggcggctcagagcagtcttcag
cactgtctggagctcagtccttcccacgccgaggcccatctcctcatggcccagatccac
ctcctgcatggcagcttcaagctctcctcccagtctctggagctctgcctcagccacaac
tttgagatccgcgagcacccgatgtaccacctgatcaaggcccaggcacagaggaagcaa
ggagagctgcaggaggccattaagaccctgcagatggccatgagtctgcccggtgtgcgg
cgggtgggctcccacaagggcaagggcaggaaggtggagctgggcacggccgactgcgtc
tccatcttcctggagctggccgaggccctctggatgaacggggagcagcacgaggctgcc
aaagtgatgcaggacaccatcaacgagttcacaggcaccccagaggagctgagagtcacc
atcgccaatgccgacctggcactgctgcgcggcgacacggagctggcactgagcatgctc
agaaacatcacacccgagcagccctactacatccaggccaaggagaaaatggcagacatc
tatctgaaccacagaaaagagaaacgtctatacgtcagctgctacagagaattggtggag
aaaatgcccagcccccatacatatcttttactgggtgatgcctatatggacatccaagag
ccagagaaggccatagaggtgtacgagctggctctgaaaaagaaccccaaagacggtgct
ctggccagcaagattgggaaagctcttgtcaagactcacaattatgcaaaggcaataaac
tattacgaggcggccctgcggagtgggcagcagaacttcctgcgctacgacctggcagag
ctcctgctgaagctgaggcagtatgagcgctgtgagaaagtcctgcatgaggccctcact
catgatgctgtaaatgagctgtcagcgctctcagaggattgccggtatctggtgttgctg
gccaaggtccagagcaaggttgccaaaaataatgaagccattctgtccctccaaagggct
cgagacgtccaggccaaagtgctgaagcgggtgcagctggagcagccggatgccgtgccc
ctgcagaagcagctcgccgcggagatctgcgccgaaatcggcaagcactactccagccag
aggggctacgagcgagctgtcaagttctacaaagaggcccttgtttattgtgagagcgat
agcaaggtgatgctggagctggctcgcttgtacctgactctggatgatatggagtcctgt
cagcagcaatgcagtgtgttactgaagagcgaccaagtcaatgaatctgccactctgatg
atggcagacctgatgttcaggaagcaggactacgaccaggccatttttcactttcagcag
cttctagagcgcaaacctgacaactacccgacactgtcacgtctgatcgacctgctgaga
cgagcagggaagctggacgaagttccccgctttctggacatggctgagaagcattccccc
agggccaagtttgactctgggtttaactactgtaaaggactttacctgtggtatacaggt
gaacccaatgatgggctacgacacttcaacaaggcaagaaaggacaatgaatggggtcag
aacgcagtgtacaacatgatcgagatctgcttgaaccctgacaatgaaactgtcggtgga
gaggtgtttgagaaccttgatggtgacattgggaactccaccgagaagcaagagtcggag
cagctggcggtgcggactgccgagaagctgctgaaggagctcaggccacagacggccgag
ggccacatccagctgcgcatcctggaacactactgcttcctggccaccaagcagactgcc
aacgtggagcgggccctgagtgtgttcacggagatcgcaaataatgagaaagatcatgtc
cctgcgttgttggccatggcgacggcctacatgatcctcaagcagaccccgcgagcccgt
aaccagctgaaacgcattgccaagatgaactggaacattgttgatgctgatgagtttgag
aagagttggctcttgctggctgatatttacatccaatcaggcaaatatgacatggcagga
gagctgttgaaaagatgcttacgtcataataagtcctgttgcaaggcatatgaatacatg
gggtacatcatggagaaagagaaagcctttagagatgctgccttgaattatgaaatggcg
tggaagtacggcaatcagaccaacccaacaattggttacaaacttgcattcaactacctc
aaagcaaagagatatgtggatgcaatagatgtgtgtcataaagtcttagatgcccatcca
aattatccaaagataaggaaggacatcttggacaaagcacgagcttctctaagatcataa
DBGET
integrated database retrieval system
