Clupea harengus (Atlantic herring): 105907995
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Entry
105907995 CDS
T09045
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04814
Motor proteins
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105907995 (dync1i2a)
09142 Cell motility
04814 Motor proteins
105907995 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105907995 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105907995 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105907995 (dync1i2a)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
105907995 (dync1i2a)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
105907995 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
ANAPC4_WD40
EIN3_DNA-bd
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
105907995
NCBI-ProteinID:
XP_012691871
Ensembl:
ENSCHAG00000027302
UniProt:
A0A6P3W7X5
LinkDB
All DBs
Position
2:complement(27344680..27368025)
Genome browser
AA seq
612 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEDRKKKEAEQQKKEAAQPHDDSELDRKRREA
DAILQSMGITSESCAVPPPMSPTAKSVGTPSEAGSQDSGDGAVGPRRGPVKLGMAKVTHV
DFPPKEMVSYTKETQTPVMTEQKEEEEEEEEEEMVPSEPAQEVEKEKPAQGNEDEEAPPH
ELTEEEKLQILHSEEFMTFFDHSTRIVERALSEHIDVFFDYSGRDLEEKDGEIQAGAKLV
LNRQFQDERWSKHRVVTCLDWCPQYPELLVASFNNNEDAPHEPDGVALVWNMKYKKPTPE
YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
VNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSLELVYKQSKTVAVTSMSFPLGDVNN
FVVGSEDGSVYTACRHGSKAGISEMFEGHHGPITGIHSHNSGGPVDFSHLFVTSSFDWTV
KLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNDTEVPTASVT
VDGSPALNRVRWAQSGREIAVGDSDGRVLVYDVGEQIAVPRNDEWTRFVRTLAEINENRD
DAEELAAQRLPA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggccgagctggagcggaagaagcagcggctggcccag
atcagagaggagaagaagaggaaagaggaggaccgcaagaagaaagaggccgagcagcag
aagaaggaagcagctcaacctcatgatgactccgagctggacaggaagcggcgcgaggcg
gatgctattctgcagagcatgggcatcacatctgaatcgtgcgccgtgcctccacccatg
tctcccactgccaaatccgtgggcacgccaagcgaggcaggcagccaagactcgggcgac
ggcgccgtgggacccaggcgcggacctgtgaagctgggcatggccaaggtcacccacgtg
gacttcccaccaaaggagatggtgtcctacacaaaggagacgcagacgcctgtgatgaca
gagcagaaggaagaggaagaggaggaggaggaggaagagatggttccatccgagcctgca
caagaggtggagaaggagaagccagcccaggggaatgaggatgaagaggcccctccgcac
gagttgaccgaggaggagaagctgcagatcctgcactctgaggagttcatgaccttcttc
gaccacagcacgcgcatcgtggagcgtgccctctccgagcacatcgacgtcttcttcgac
tacagcggccgcgacctagaggagaaagacggagagatccaggccggagccaagctggta
ctgaacaggcagtttcaagacgagcgctggtccaagcatcgcgtggttacctgtctggac
tggtgcccacagtatcctgagctgctggttgcctcattcaacaacaacgaggacgccccc
cacgagccagacggggtggccctggtgtggaacatgaagtacaagaagcccacgccagag
tacgtcttccactgccagtcggctgtcatgtctgccaccttcgccaagttccatcccaac
ctggtggtggggggcacatactcggggcagattgtgctgtgggacaaccgcagcaacaag
aggacgcccgtgcagagaaccccgctgtcagccgccgcacacacgcacccagtgtactgt
gtgaatgtggtgggcacccagaacgcccacaatctgatcagcatctccaccgacggcaag
atgtgctcctggagcctggacatgctgtctcagccgcaggacagcctggagctggtgtat
aagcagtccaagaccgtggccgtcacctccatgtccttccctcttggagacgtcaataac
tttgtggtggggagcgaggatggctctgtctacacagcctgccgtcacggaagcaaggcg
ggcatcagcgaaatgttcgagggccaccacggacccatcacaggcatccacagccacaac
tccggagggcccgtcgacttctcccacctcttcgtcacgtcctccttcgactggaccgtc
aaactgtggagcaccaagaacaataagcctttgtactccttcgaggacaactcggactat
gtgtacgacgtcatgtggtcccccacccatccggcattgtttgcctgcgttgacggagtg
ggtcacctcgacctgtggaacctcaacaacgacactgaggtgcccacggccagcgtgacg
gtggacggcagcccagccctgaaccgggtgcggtgggcccagtctggccgcgagatcgcc
gtgggagactccgacggacgggtcctcgtctacgatgtcggagagcaaatcgctgttccg
cgcaacgacgagtggacccgctttgtgcgcacgctggccgagatcaatgagaaccgcgac
gacgcggaggagctggccgcccagcgcctgcctgcctga
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integrated database retrieval system
