Clupea harengus (Atlantic herring): 105908002
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Entry
105908002 CDS
T09045
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105908002 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105908002 (pou2f1b)
03021 Transcription machinery [BR:
char03021
]
105908002 (pou2f1b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
105908002 (pou2f1b)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
105908002 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105908002
NCBI-ProteinID:
XP_031414500
Ensembl:
ENSCHAG00000006127
UniProt:
A0A6P8EQY7
LinkDB
All DBs
Position
2:26188305..26207019
Genome browser
AA seq
716 aa
AA seq
DB search
MADGGAASQDESSGPDSKMSNPSESSKCAMESGDGNTGAQTNGLDFQRQTVQTTNAITNA
HAQALLQQLTLTPAQQQMLLQQAQAQLLAAAVQQHSASQQSSTSGANISASAATPITQIP
LSQPIQITPVSQASLPLPYLSSWGGCGGVSQMFNVPGQMQLQQLQQQNPNLQQFVLVQPG
LPIATQLQQLQPAQFIISQTPQGQQSLLQAPNLLTQLPQSQANLLQTPSITLATQPATPT
RTIAATPIQPLSHTQSTPKRMDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAM
GKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLTSDQALSSPSSLGS
PGLGIEGLNRRRKKRTSIETNIRVALEKSFIEQNQKPTSEEITMIADQLNMEKEVIRVWF
CNRRQKEKRINPPSSGGMGTTPIKTIFSSSNPLVSSTTSLTPTTLTVNSALPLTSTSVSS
LGFTGTTITAAPTSTNTASVISATPMVTTVAAAPPTSLSPSPSLHTSGGGAGESGGGPQE
GSGGCLVSQTPISASALASALSSGQVMVAGPGLSTSASLAAMAAAAGLNPGLMASSQFNH
GGALLSLGPGGLGSALSPALMSNSTLATIQGVWSALASSGTLPITSLDGSGNLLFANASA
GGTPLFLNPQNLSLLASNPVSLVSSANLQLTQDAHQSVVTTAAVPTSTISTASKAQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctaaaatgagt
aatccgtctgaatcgagtaaatgtgcaatggagagtggcgacggaaacacaggtgcccaa
acaaatggactggactttcagagacagacagtgcagacaacaaacgcaatcaccaacgca
catgcacaagctctgctccaacagttgactctgactccggcacagcagcagatgttgctg
cagcaggcccaggctcagttgctggcggcggccgtgcagcagcactcagccagccagcag
agcagcaccagcggagccaacatctccgcctccgcggccacacccatcacccagatcccc
ctctcccaacccatccagatcacgcctgtaagtcaggcttcccttccgctaccctacctc
tcatcctggggagggtgtggtggggttagccagatgttcaatgttccagggcaaatgcag
ctgcagcagcttcagcagcagaaccccaacctgcagcagtttgtgctcgtgcagccgggg
ctgcccatcgccacccagctgcagcagctgcagccggcacagttcatcatctcccagacg
ccgcagggccagcaaagtctcctgcaggcccccaacctactaacacaactacctcaaagc
caagccaacctcctgcagactcctagcatcaccctcgccacccagcccgcgaccccgact
cgcacgatagcagctacccccatccaacccctctcccacacccagagtacaccaaagcgc
atggacacgcccagtctggaggagcccagtgacctggaggagctcgagcagttcgccaag
accttcaagcagaggagaatcaaactgggcttcactcagggggacgttggccttgccatg
ggaaagctttatggcaatgacttcagccaaaccaccatctctcgatttgaggccttgaac
ctgagctttaaaaacatgtgcaagttgaagcctctgctagagaagtggctcaacgatgca
gtgtgtgcagagaacctgacgtctgaccaggccctgtccagccccagctccctgggctcc
cctggcctgggcatagaggggctgaaccgccggcgcaagaaaaggaccagtatcgagacc
aacatccgcgtggccttagagaagagctttatagagcagaaccaaaaacctacctctgag
gagatcaccatgatcgccgaccagctcaacatggagaaggaggtgatccgcgtgtggttc
tgcaaccgccggcagaaggagaagaggatcaaccctcccagcagtggtggcatgggcacc
acccccatcaaaacgatcttctcctcctccaatcccctggtgtccagcacgacgagcctc
acaccgaccacactgactgtaaactcagctttgcctctcaccagcacgagtgtctccagc
ctcggcttcactggcacaaccatcacggcagcacccacctctaccaacacagcctcggtc
atctctgccacgcccatggtcactaccgtagccgctgcccctccgacctcgctaagcccc
tccccgtcactacacacatctggtggcggggccggtgagtcgggcggggggccccaggag
gggtccggcgggtgcttggtatcacagacccctatttctgcctccgcactggcttcagct
ctgagctcgggccaggtgatggtggcagggccggggctctccaccagtgccagccttgct
gccatggccgccgctgcgggcctcaaccctggacttatggcctcttcacagttcaaccat
gggggggccttgttgagtctgggaccaggaggtttgggcagtgccctgagtccagcgctg
atgagcaacagcaccttggccacgatccaaggggtgtggagcgcattagcctctagtgga
actctacccatcacttctctggatggaagcggtaacctgctgtttgccaacgccagcgcg
ggcggcacgccactcttcctcaacccgcagaatctgtcgctgctcgccagcaaccccgtc
agcctggtgtcaagtgccaacctgcagctcacgcaagacgcccaccagagcgtggtcacc
acggctgcagtgcccacctccaccataagcaccgcctccaaggcgcagtga
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