Clupea harengus (Atlantic herring): 105908013
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Entry
105908013 CDS
T09045
Symbol
cps1
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00220
Arginine biosynthesis
char00250
Alanine, aspartate and glutamate metabolism
char00910
Nitrogen metabolism
char01100
Metabolic pathways
char01200
Carbon metabolism
char01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
105908013 (cps1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
105908013 (cps1)
00220 Arginine biosynthesis
105908013 (cps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105908013 (cps1)
Enzymes [BR:
char01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
105908013 (cps1)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
105908013 (cps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
105908013
NCBI-ProteinID:
XP_031415540
Ensembl:
ENSCHAG00000027784
UniProt:
A0A6P8EUB6
LinkDB
All DBs
Position
2:complement(28160480..28194946)
Genome browser
AA seq
1499 aa
AA seq
DB search
MTKILTAYTAARLTLLKQGWLSGRSRGLVNWKSTRLFSVKAQTAHLVLEDGTRMKGLSFG
KNRSMAGELVFNTGLVGYPEALTDPSYSGQILTLTYPIVGNYGVPNTQELDELGLRKNVE
SDRIHVSGLLVQDYSYEYSHWNSVKSLAQWLEEEGVPALFGVDTRMLTKIIRDKGTVLGK
IEFDGEPVELTDPNQRNLIAEVSTKETQIFGKGNPIKVVAVDCGIKHNIIRLLVKRGAEV
HVVPWDQDLMSLDYDGLFISNGPGDPSLAGPLIENVRKVLESDRPQPVFGICMGNQITAL
AAGAHSYKLPMGNRGQNQPVLNVMTSQAFITAQNHGYGIDSESLPEGWSPLFINANDGTN
EGIMHDSKPIFTAQFHPEAKGGPTDTEFLFDAFLSLIKNGKKASIVSVMPKKPDIPPRAK
VSKVLVLGSGGLSIGQAGEFDYSGSQAIKALKEENLQTVLMNPNIASVQTNEVGTKQADS
VYFLPVTPQFVTEVIKAERPDGILLSMGGQTALNCGVELYSSGVLQKYGVKVLGTPVEAI
MATEDRQLFADKLMEINEKIAPSFAVETVADALKAADKIGYPVMLRSAYALGGLGSGLCG
NKDKLEETARKALAMSSQILVEKSLMGWKEVEYEVVRDISNNCVTVCNMENFDPLGIHTG
DSIVVAPSQTLSNEEYHMLRETAIKVVRHLGIVGECNIQYALHPASLDYCIIEVNARLSR
SSALASKATGYPLAFVAAKLALGIPLPEIKNAVSEKTTACFEPSLDYIVTKIPRWDLDRF
QGMSLEIGSAMKSVGEVMAVGRTFEESMQKALRMCHPSVDGFVPHLPLKKAWADQLNLQQ
ELAVPSSTRIFSLAKALHSGVGVDEIHQLTAIDKWFLHKLRRITELEQHLCQFNSLSVPT
ELLLKAKQDGFSDRQVGHALGTSEGEARALRLRQDIRPWVKQIDTLAAEYPTVTNYLYCT
YHGEEHDLEFSDQGVMVLGCGPYHIGSSVEFDWCAVSSIRALRQMGRRTVVVNHNPETVS
TDFDECDRLYFEELTLERILDITQQEGCTGCIVSVGGQIPNNQAMPLHLNGVNILGTNPL
QIDRAEERSVFSTILDELGVAQAPWRALNSLEDAYSFANEVGYPCLLRPSYVLSGSAMNV
AYGEEEMKRFLEEATQVSQEHPVVITKFIQGAREVELDAVAKNGKVLVHAITEHVEDAGV
HSGDATLMLPTQSISQGALEKIKTATRKIAKAFEISGPFNTQFLVKGNDVMVIECNLRAS
RSFPFVSKTIGVDFINVATRVMVGEPLDESRLPSLENPIIPVDYVGIKAPMFSWPRLRDA
DPVLRCEMASTGEVACFGPNIYSAFLKAMLSTGFKLPQKGILIGIQQSFRPNFLLTAYQL
NEEGFKLYATEGTSAWLNANDVPTSPVAWPSQDEKDGTLPSINRLIREGEIDLVLNLPNN
NTRFIKDNFVIRRMAVDHGVPLITNFQVAKLFAEAVKYASELDTTSLFHYRERNANKQH
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagatattgacggcttacacggcagccaggttaacattactgaagcaaggatgg
ctcagtgggagaagcagaggtcttgtaaactggaagtcaactcgcctgttcagtgtaaag
gcccagactgctcaccttgtcctggaggatggcactcgaatgaagggcttgtcctttgga
aagaatcgttctatggcaggcgagctagtcttcaacacaggacttgtagggtaccccgag
gcgctgactgatcccagctacagtggccagattttaactctcacctaccctatcgtggga
aactacggcgtgcccaatacacaggagctagatgagctgggattgagaaagaatgttgaa
tctgaccgaattcatgtgtctgggctgctggtgcaagactatagctatgaatacagccac
tggaactctgtcaaatccttggctcagtggctagaagaagaaggggtgcctgcattgttt
ggtgtggataccaggatgcttactaaaatcattcgggataagggaacagtcttgggaaag
attgagtttgatggggagcctgtcgagcttacagaccccaaccagcgtaatctaatcgca
gaagtttccacaaaagaaacacagatatttgggaaaggaaacccaatcaaagtggtagca
gttgattgtgggatcaaacacaacataatcagactccttgtcaagcggggagctgaagta
catgtggtaccatgggaccaagacctgatgagcctggactatgatggtctgtttatttcc
aatggccctggggacccctcattagctggccctctgattgagaatgtccgcaaggtcctt
gagagtgatcggccccagcctgtgtttggcatctgcatgggtaaccagattactgctctt
gcagcgggagctcattcctacaagctgcccatgggcaacaggggacagaatcagccagta
ctgaatgtgatgacaagccaagcctttatcacggcacagaaccatgggtatggaatcgac
agcgagtcgctaccagagggctggagccctctattcatcaatgcaaatgacgggaccaac
gagggcatcatgcatgactccaagcctatcttcacagcacagttccacccagaagcaaag
ggaggccctactgacacagagttcctgttcgatgccttcctctcgctcattaagaatggg
aagaaggccagcatagtgtctgtgatgcctaagaaaccagacattcctccaagagctaag
gtgtcgaaggtgctggtactgggctctgggggtctctccattggccaggcaggagagttt
gactactctggatcgcaggctatcaaggccctgaaggaagagaacctacagacagtgctg
atgaaccctaacattgcctcggtgcagaccaacgaggttgggaccaagcaggccgactct
gtctacttcctgcccgtcaccccacagtttgtcacggaagtcatcaaggcggagcggcca
gacggcatcctgctctccatggggggccagacggccctgaactgcggtgtggagctttac
agcagtggagtcctgcagaagtacggggtgaaggtgttggggactcctgtggaggccatc
atggccactgaggacagacagctctttgcagacaagctgatggagatcaatgagaaaata
gcacccagctttgctgttgagacggtggcagatgccctgaaggctgcagataagattggc
taccctgtcatgctccgctctgcctacgcactcgggggtctggggtcaggcctgtgtggc
aacaaggataagctggaggagacggcaaggaaggctctagccatgagcagtcagatcctg
gtggagaagtccctgatgggctggaaggaggtggagtacgaggtggtcagggatatctcc
aacaactgcgtcactgtctgcaacatggagaactttgacccgctcggcatccacacaggt
gactccattgtggtggcccctagccagaccctgtccaatgaggagtaccacatgctgagg
gagactgccatcaaggtggtgcggcacctgggcattgtgggagagtgcaacatccagtat
gccctccaccccgcctcactggactactgcattattgaggtcaacgccaggctctccagg
agctcagctctggcctctaaggccacaggctaccctctggcttttgtggccgccaaactg
gccctgggcatccctctgccagaaattaagaacgctgtgtcagagaagaccaccgcctgc
ttcgagcccagcctggactacatcgtcaccaagatcccccgctgggacctggaccgcttc
cagggcatgtccctggagattggcagcgccatgaagagtgtgggcgaggtgatggcggta
ggccgcacctttgaggagagcatgcagaaggccctgcgcatgtgccacccctccgtggac
ggctttgtgccgcacctgcccctcaagaaggcctgggccgaccagctgaacctgcagcag
gagctggcagtgccctccagcacacgcatcttctccctggccaaggccctccacagcggg
gtgggcgtggacgagatccaccagctgacagctatcgacaagtggttcctgcacaagctc
cgtcgcatcaccgagctggagcagcacctgtgccagttcaacagcctctccgtgcctacg
gagctgctgctcaaggccaagcaggacggcttctccgaccgccaagtgggccatgccctg
ggcacctccgagggcgaggcccgggcactgaggctgagacaggacatccggccctgggtc
aaacagattgacacccttgcagcagaatacccaactgtcaccaactatctgtactgcact
tatcatggcgaggagcatgacctcgaattcagtgaccagggtgtaatggtgctgggatgt
ggcccttatcacattggcagcagcgtggagttcgactggtgcgccgtgtcgagcatccgc
gccctgcggcagatgggccggcgcacggtggtggtgaaccataacccggagacggtcagc
acggactttgacgagtgcgacaggctgtactttgaggagctgaccctggagcgcatcctg
gacatcacacagcaggagggctgcaccggctgcattgtttctgtaggcgggcagatcccc
aacaaccaggccatgccgctccacctgaacggggtgaacatcctgggcaccaacccgctc
cagatcgaccgtgccgaggagcgctccgtcttctccaccatcctggatgagctgggtgtg
gcccaggcgccctggagggccctcaactcactggaggatgcctattcctttgctaatgaa
gttggctacccatgcctgctgcggccatcttatgtcctgagtggctccgctatgaatgtg
gcctatggagaggaagagatgaagaggttcctggaggaggctactcaggtgtcacaggag
catcctgtggtcatcacaaagttcattcaaggagccagagaggtcgagctggacgctgtg
gccaagaatggcaaggtgctggttcatgccatcaccgagcacgtggaggatgcaggggtt
cactcgggagatgccacgctgatgctgcccactcagtccatcagccagggggccctggag
aagattaagactgcaacccggaaaattgccaaggcattcgaaatttcagggccgtttaac
actcaatttttggtgaaaggcaatgatgtcatggtgattgaatgcaacctgcgagcctca
cgctccttccccttcgtgtccaagactatcggcgttgacttcatcaacgtggccactcgc
gtcatggtgggggagcctctggatgagtcccgcctcccctccctggagaaccccatcata
cctgtggactacgtgggcatcaaggctccaatgttctcctggcctcgcctcagggatgct
gaccctgtcctgcgctgtgagatggcgtccactggagaggtggcttgctttggaccaaat
atctactcagcgtttctgaaggccatgctctccaccgggttcaagctccctcagaaagga
atcctcataggcatccagcaatctttcagacccaacttcctgttgacggcataccagctg
aacgaggagggtttcaagctttatgccactgaaggcacctcagcctggctaaatgccaat
gatgtgcccaccagtcctgtggcctggccaagccaagatgagaaggatggtactcttccc
agcatcaacaggctcattagagaaggcgaaattgacctggtgttgaacctccccaacaac
aacacacgtttcatcaaggacaactttgtgatccgccgcatggctgtggaccacggggtg
cccctcatcaccaacttccaggtggccaagctgtttgctgaagctgtgaagtatgccagt
gagcttgacaccaccagcctcttccactaccgagagcgcaatgctaacaaacagcattag
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