Clupea harengus (Atlantic herring): 105908019
Help
Entry
105908019 CDS
T09045
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
KO
K04683
transcription factor Dp-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
char04110
Cell cycle
char04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105908019 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105908019 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105908019 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105908019 (tfdp1a)
03036 Chromosome and associated proteins [BR:
char03036
]
105908019 (tfdp1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
105908019 (tfdp1a)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105908019 (tfdp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
FMP23
Motif
Other DBs
NCBI-GeneID:
105908019
NCBI-ProteinID:
XP_012691911
Ensembl:
ENSCHAG00000006378
UniProt:
A0A6P3W7V3
LinkDB
All DBs
Position
2:26249969..26258923
Genome browser
AA seq
407 aa
AA seq
DB search
MAKDAGLIEANGELKVFIDQNLSPGKGVLSLVTVHPQTIPIGKQLLPKTLGPSNVNIAPH
LVIGTPQRPSGSNAILVNSPHTPSSQFLTQTQPSEASPWSTGKRSKKGEKNGKGLRHFSM
KVCEKVQKKGVTTYNEVADELVAEFSSTDNHISPNDSHVYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RQTEQQTNRQPPHNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNMFEIHDDIEVL
KRMGMAYGLEAGKCSPEDLKVARGLVPKALEPYVTEMAQGPISSVFMTGASSSNGGRYHV
GSDSGADGTQASSSNDSHYSGSRVETPVSYMGDDDDEDDYDENDDDD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatgctggtctgattgaagctaatggggagttgaaggtttttattgatcag
aatctgagtcctggtaaaggtgtcctgtccttggtgacggtccatccacagacaattccc
attgggaagcaacttctgccaaaaacacttgggccgtctaatgtcaacattgccccacat
ttggtgattggcacaccccaaagacccagtggctccaatgccattctggtgaacagtccc
cacacgccgagctcacagttcctcactcagacccagccgtccgaagcctcgccctggtcc
acagggaagcgcagcaagaagggagagaagaatgggaaggggctgaggcatttctcaatg
aaggtgtgcgaaaaggtccagaagaagggagtcaccacctacaatgaagtggccgatgag
ctggtggctgaattcagctctacagacaaccacatttcccccaatgactcacatgtgtac
gatcagaagaacatcagacggcgtgtctatgatgctctaaatgtgttgatggccatgaac
atcatctctaaagagaagaaggagatcaagtggattggcctacccactaactcagctcag
gagtgccagaacctcgaggtggagagacaaagacgacttgaaagaatcaagcagaaacag
tcccaactccaggagttaattttacagcaaatagccttcaagaacctggtacagcgcaac
cgtcagacggaacagcagaccaaccggcagccaccgcacaactcggtgatccatctgccc
ttcatcatcgtcaacaccagcaagaagacagtcatagactgcagcatttccaatgacaag
tttgagtacctatttaactttgacaacatgtttgagatccatgacgacattgaggtgctg
aagcgcatgggcatggcctacgggttggaggcgggcaagtgctcccctgaggacctcaag
gtggcgcgtggcctggtgcccaaggcactggagccctatgttacagaaatggcccagggt
cccatcagtagcgtgttcatgactggtgcatcgtcctccaatggaggtcgttatcatgtc
ggcagtgacagtggagcagacggcactcaggcatccagctctaatgactctcactacagc
ggctcccgggtggagacccccgtgtcatacatgggggacgacgacgatgaagacgactac
gacgagaatgacgatgatgattaa
DBGET
integrated database retrieval system
