Clupea harengus (Atlantic herring): 105908045
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Entry
105908045 CDS
T09045
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04514
Cell adhesion molecule (CAM) interaction
char04517
IgSF CAM signaling
char04518
Integrin signaling
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105908045
04517 IgSF CAM signaling
105908045
04518 Integrin signaling
105908045
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105908045
09142 Cell motility
04810 Regulation of actin cytoskeleton
105908045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105908045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105908045
04515 Cell adhesion molecules [BR:
char04515
]
105908045
04090 CD molecules [BR:
char04090
]
105908045
Membrane trafficking [BR:
char04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105908045
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105908045
Cell adhesion molecules [BR:
char04515
]
Integrins
Integrin beta subunits
105908045
CD molecules [BR:
char04090
]
Proteins
105908045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
EGF_2
EGF_TEN
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
105908045
NCBI-ProteinID:
XP_012691957
Ensembl:
ENSCHAG00000016245
UniProt:
A0A6P3W826
LinkDB
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Position
2:29424510..29431067
Genome browser
AA seq
780 aa
AA seq
DB search
MSPSVCLQVFILLSATRNVWPEETCTKGAVNSCADCIVSGPFCAWCKFENFTKQGEPDAA
RCNTKAKLKENHCKETDIISPENTYKPIKQKPLTKATGTADPVQVYPQEVKLDLRPGLPQ
TITLKFKRAEGYPVDLYYLMDLSYSMKDDLDKLKTLGKDLVSALQTITGGSGKARIGFGS
FVDKTVLPFTNTNKEKLKNPCQDETERCQPPFGFKHIVKLTNQYQLFNDEVAKQNISGNL
DTPEGGMDAIMQAAMCENDIGWGNATRLLVLATDAGFHMAGDGKLAAILEPNDETCHLQK
NIYSQSSLLDYPSVGQIARALDMKNIQPIFAVTSTVTDVYRELSKMIPKSEVGELSSDSG
NVVKLIEDAYNKLSSKVIVTHDVPPEKVTVKYTSDCKDGTEPGDEGVCDNVALGQEVTFF
VQVTALECLNNVSFYVGPRGFNEKMKVTISTRCECECDDPVEPQHPHCARQGEVKCGTCK
CNKGYTGQKCECSQGNLDDVSLRQMCRRENNTECEGRGDCVCGQCQCHTSPSGQPYYSKY
CECDDEHCQMHDNKPCSGHGDCKCGICQCHADYEGDACHCKKSNAACKTGSTICNGRGTC
ECNACKCSRGYQKPFCLTCQACTPPCHQSAKCIECLGFGDGPYQKNCSTACNHLTHTTVE
KLNPFNPDARKCEVKDSKNCWLDFTMKELQGFDKYEVEIQKERRCPEPPNIIAIVAGSVA
GVALIGLLILLIIKALLYARDLKEWKKFENEKKKTKWANADNPLFKEATTTVTNPTFSGE
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccatctgtgtgtcttcaagtcttcatcctgctgtcagccacaagaaatgtctgg
cctgaggaaacctgtacgaagggtgcggtcaactcctgtgctgactgtatcgtgtctggg
ccattctgtgcgtggtgcaaatttgagaatttcaccaaacaaggcgagccggatgcagca
cgctgtaacaccaaggcaaagctgaaggagaatcactgcaaagagaccgacatcatctct
ccagaaaacacttacaagcctattaaacaaaagccactgacaaaagccactggaacagca
gacccagtgcaagtctatcctcaagaggttaaactggaccttcgacctggccttccgcaa
acaatcaccctcaagtttaaaagggcagagggctacccagtggatctttactacctaatg
gacctctcctactccatgaaggatgacctggacaaattaaaaactctgggaaaagattta
gtttcagcactacaaacgataactggtggcagtggcaaagcaagaattggtttcggctca
tttgttgacaagactgttctgccattcacaaacaccaacaaagaaaaactgaagaatcct
tgtcaagacgagaccgagcgctgtcagccaccatttggtttcaaacatattgtcaagctg
acaaatcaatatcagttattcaatgacgaagtagccaagcagaacatctctggaaatctc
gacactcctgaaggaggcatggatgccatcatgcaggccgcaatgtgtgagaacgacatt
ggctggggaaatgccacacgcttgctagttctagccaccgacgctggcttccatatggct
ggtgatgggaaattggctgcaattctggaaccaaatgatgaaacatgccacttgcagaag
aacatatacagccaaagcagcttactggactatccatctgttggtcaaattgcaagggcc
ttagatatgaaaaacattcagcccatttttgccgtcacaagcaccgtgacagatgtgtac
agggagctgagcaagatgatcccaaagtcagaggtgggagaactgtctagcgattctggg
aatgtggtcaagttaatcgaggatgcctacaataaactctcctctaaagtcattgtgact
catgatgtaccgccagaaaaggtgacggtgaaatacacctcagactgtaaagatggaacc
gagcctggagacgagggggtctgtgataatgtagccctcggacaggaggtgactttcttc
gttcaagtgacggcacttgaatgcctgaacaacgtttccttctatgttggcccaagaggc
ttcaatgaaaaaatgaaggtgaccatttcaacccgctgtgaatgtgaatgcgatgatccg
gtggagccgcagcacccgcactgtgctcgtcaaggagaagtcaaatgtgggacgtgcaaa
tgcaataagggttatacaggccagaagtgcgagtgtagccaggggaatttggatgacgtg
agcctgaggcaaatgtgccggagggagaacaacacagagtgtgaaggtcgcggggactgt
gtctgtggtcaatgccagtgccacaccagcccgagtggtcaaccctactacagtaaatac
tgcgagtgtgacgacgagcactgccagatgcacgacaacaagccgtgttcaggtcatggg
gactgtaagtgtgggatatgtcagtgtcacgccgattacgaaggcgatgcctgccattgt
aaaaagtcgaacgcggcctgcaaaactggcagcaccatctgcaatggccgtggcacgtgc
gagtgcaatgcgtgcaagtgctctaggggctaccaaaagcctttctgtctgacctgccag
gcttgcacaccaccgtgtcatcagtctgcgaagtgtattgagtgcctgggctttggtgat
ggtccgtaccagaaaaactgctccacagcctgcaatcacctcactcacaccacagtggaa
aaactcaacccattcaacccagatgctaggaaatgtgaagtaaaggactcgaaaaattgc
tggctcgatttcaccatgaaggaactgcaaggatttgacaaatacgaggttgaaatacaa
aaggaaagaaggtgccccgagccaccaaacatcattgccattgtagctggttctgtcgct
ggggtggccctgattggcctcctgatcttactcatcatcaaggctctgctgtacgcaaga
gacttaaaggagtggaagaagtttgagaatgagaagaagaaaaccaaatgggccaatgct
gacaatcccttatttaaggaggcaacaactacagtgacaaatcctacgttctctggagag
tga
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