Clupea harengus (Atlantic herring): 105908046
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Entry
105908046 CDS
T09045
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105908046 (gabpa)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
105908046 (gabpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Rv0428c_C
Motif
Other DBs
NCBI-GeneID:
105908046
NCBI-ProteinID:
XP_012691959
Ensembl:
ENSCHAG00000006644
UniProt:
A0A6P8ERG3
LinkDB
All DBs
Position
2:26280733..26287104
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AA seq
442 aa
AA seq
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MSKSETEEMIEIEIDGQEKQDCVEEGVEEQTITSAELITQDIDINEPVGNLKKLLEPRLQ
IPLDGYEICLQDIHLSAEHSLFDQGVKTDGTVQLSVQIISRPDEQKLNILEIVKPVETVE
VVIDPDAAGEEAHLMEDGQMIAVERSAITDDTSEQVTRWAAALEGYRKEQVRLNIPYDPV
QWTADQVIHWAVWVMKEFSIEEMEVGSIHIPGRDLCTLNQDEFLQRVPNGEILWSHLELL
RKYVLASQEQAVQEATVTIDQPVQIIPAPVMQTTPTAIKVLKQSKGPRTPRISGEERSSP
GNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMN
YEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNSLVTECEQKKLARVQ
LHGIHQPLTTVTLATTAMDKDS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagtgaaacagaagagatgatagaaattgagattgatggtcaagaaaaacag
gattgtgtggaggagggagtcgaggagcagaccatcacatcagctgagctcatcactcag
gacattgacatcaatgagcccgtcgggaatctcaagaagctgctggagccccggctccag
atcccactggatggttatgagatctgcctgcaggacattcatctgtcagcagaacacagc
ttgttcgatcaaggtgttaagacagatggcactgtacagctcagtgtgcagatcatctcc
agaccagatgagcagaagctgaacatcctggagatcgtgaagcccgtggagacggtggag
gtggtgatcgacccggatgcggcaggcgaggaggcccacctgatggaggacggtcagatg
atcgccgtggagcgttcagccatcacagacgacacgtcagagcaggtgacgcggtgggcg
gctgctctagagggctacaggaaggagcaggtccgcctcaacatcccatacgacccggtg
cagtggacggcagaccaggtgatccactgggctgtgtgggtgatgaaggagttcagcatc
gaggaaatggaggtgggcagtatccacatcccgggtcgtgacctctgcaccttgaaccag
gacgagttcctgcagcgggttcccaacggagagatcctgtggagccatctggaactgctg
cgcaaatatgtgttggccagccaggaacaggcagttcaggaagccacagtgactattgac
cagccggtccagatcatccccgcccctgtgatgcagaccacgcccacagccattaaggtg
ctgaaacagagcaaaggccctcgaacaccacgcatcagcggagaagagcgcagttcccct
ggcaaccgcacaggtaacaatgggcagattcagctgtggcagttcctgttggagctgctg
acggataaggacgcccgggactgcatctcctgggtgggcgaggagggcgagttcaagctg
aaccagcccgagctggtggcccagaagtggggccagcgcaaaaacaagcccaccatgaac
tacgagaagctcagcagagccctcaggtactattatgacggcgacatgatcagcaaggtg
cagggcaagcgtttcgtctacaagttcgtgtgcgacctgcggacgctgatcggctacagt
gcggccgagctcaacagcctggtcaccgagtgcgagcagaagaagctggcccgcgtgcag
ctccacggcatccaccagcccctcaccacggtaaccctagccaccaccgccatggacaag
gacagctga
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