Clupea harengus (Atlantic herring): 105908065
Help
Entry
105908065 CDS
T09045
Symbol
med12
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105908065 (med12)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
105908065 (med12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
105908065
NCBI-ProteinID:
XP_031443472
Ensembl:
ENSCHAG00000023052
UniProt:
A0A6P8H719
LinkDB
All DBs
Position
20:complement(24778924..24811492)
Genome browser
AA seq
2196 aa
AA seq
DB search
MMAAFGILSYEQRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRCNTFADTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQSPNQPCGSPPPPPPAEVETAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECFEKIRPGEDELLKLLLPLLLQYSGEFVQSAYLSRRLAYF
CTRRLNLLLSDGSLGPSAGGHPAHGISGQSGNALPPTPTSQPAGGTQPQTPFTDFYICPQ
HRPVVFGLSCMLQSIVLCCPSALVWHYSLTDSRNKTGSPLDLLHIAPSNLPMPGGNTTFT
QQVRVKLREIEDQIKERGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFS
NSLDSLYNRIFGSGQSKDGHEITPDDDAVVTLLCEWAVVSKRSGRHRAMVVAKLLEKRQT
EIEAERCGESEVVDEKGSVSSGSLSAATMPVFQDVLLQFLDTQAPILTDPANDSERVEFS
NLVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDDSERKEQDAGSS
VKMEDTGLSESMEIDHNSSANFDEMFSPPMHESKGSPSPEKPSEGHGAPEQESKSTGKDK
GLDPAFPQVYDQPRHIQYATHFPIPQEESASHECNQRLVVLYGVGKQRDEARHAIKKITK
DILKVLNRKXTAETGGEEGQKRKRSKPEAFPTAEDIFSKFQHLSHFDQHQVTSQVSRNVL
EQITSFALGMSYHLPLVQHIQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSS
LVGSYTTGLCLGIVAVLRRYHSCLILNPDQTAQVFDGLRIVVKSGVNPADCSSAERCILA
YLYDLYTSCSHLKSKFGEIFSEFCSKVKNSIYYNIDPSDSNMLWDQAFMIEAIANPSAHN
LNHSMVGQLLNDSAANRYSFVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWL
GVLKALCCSSNNGNCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIP
SLLNAACSEQDSEPGARLTCRILLHLFRTPQRNPCPQDGKSDKSSVGIRSSCDRHLLAAS
QNSIVVGAVFAVLKAVFMLGDAELKGSGFSHPTGLDDIGDDDIGSKKSGGRNVSIETASL
DVYAKYVLKSICQQEWVGERCLKSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSEE
GDNPQRQRIKRILQNMDQWTMRQSCLELQLMIKQSTNNELYSLLENIAKATIEVFQKSAE
MNSSNLSGNGSAISGSSVSNSNNTSKLKPVLSSSERSGVWLVAPLIAKLPTSVQGHVLKA
AGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQ
VQQIVHNWREDQYQDDCKAKQMMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIIS
SGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGD
RQSESLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFEKEGLQVSTKQKISPWDV
FEGLKHSAPLSWGWFGTVRVDRKVTKFEEQQRLLLYHTHVKPKPRSYYLEPLNLPPEEEE
PPTPVPQEPEKKMAEAVKAEKNVSTVPAEPNKKKSKKKKQPPAAKVEDYGARNPAVVPYP
GGMSQDVMMSQQPLYNRMGYNQAPMNMYAQNQPLPPGGPGLDSPYRPRNMQPKQAMPTRP
TYPGMVQMPGSMPGMMPGMQKDQFPMGYKPQAPMAHNQMLRQQLQVRLSQMQMRQMTSNP
QYSSMQQSQGISQGYPNYGALMGGMQSHPSQPGGIVPPSYNQNFQGNHPGTNPGGMDTLR
QMPQRPSGYVHQQAPGGYPHPMQNPQRFQHQAMQQSQLMHGGHLGGGQGVHPTMRPNQML
EQQQQQQQQQQQQQQQQQQQQQAQQQQFLRQQQALRVQQQQQVQQQQVQQQQQQQQQQQQ
QQQQQQQQQQQQQQVQQQQQVQPQQVQPQQVSAAQAPAQVQQNQALGMQALPPQQPMFPR
QGMQQTQQQQQTAALVRQLQQQLSNTQPGQNTAPYY
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcgtttgggatccttagttacgaacaacgacccttgaagcggccaaggctc
gggcctccagacgtttatcctcaagacccaaaacaaaaagaggatgaattgactgcattg
aacgtgaagcagggattcaataaccaaccagcagtatcaggcgatgaacatggcagtgca
aagaatgtcaatttcaacccctctaagattagttcaaatttcagcagcatcattgcagag
aagctgcgatgcaacacattcgccgacacaggcaagcggaagccacaggttaatcagaag
gacaatttttggctcgtcacagcaaggtctcagagctccattaacaactggttcacagac
ctggcagggaccaaacctctcacacagctggcaaagaaggttcccatctttagtaaaaaa
gaggaagtgtttgggtatttggccaagtacacagtgccagtgatgcgcgccgcatggatg
atcaaaatgacgtgtgcgtaccatgcagccatcacggagaccaaagtcaagaaacgccac
gtgatcgacccttgcatcgagtggactcagataattactaagtacctgtgggaacagctg
cagaaggtcgcagagttttaccgtcaatcccccaaccagccgtgcggctcccctcccccg
cccccccctgctgaggtggagactgccatgaagcagtgggagtacaacgagaagctggcc
atgttcatgttccaggatggcatgctagacagacatgagtttctgacatgggtgctggag
tgttttgagaagatcagacctggcgaagatgagctactcaaactgctgctgccgctcctg
cttcagtactcgggagagttcgtgcagtcggcctacttgtccaggcggctggcgtacttc
tgcacgcgccgactcaacctgcttctgagtgacgggagcctcgggcccagcgccggaggg
catcctgcccacgggatctccggccaatcagggaacgctctgccccccacccccacctcc
cagccggctgggggcacccagccccagactccattcacagacttctacatctgcccccag
cacaggcctgtggtgtttggcctgagctgtatgctacagagcatcgtgctgtgctgcccc
agtgccctggtgtggcactactctctgacagacagccggaacaagacgggctcccctctg
gacctcctgcacatcgccccgtcaaacctccccatgcctgggggaaacacaaccttcacc
caacaggtgcgagttaaattacgagagattgaggatcaaattaaagagcgaggccaggcg
gtagagtttcgatggtcatttgacaagtgccaagaaacgacagcaggttttacgattggc
cgagtattgcacactctagaggtcctagacaaccacagctttgagaagtcggacttcagt
aactcgctggactctctctacaaccggatctttggctcaggacagagcaaagacggtcac
gagattactccagacgatgatgcagtggtcactctgctgtgtgagtgggctgtggtcagc
aagcggtctggccgacacagggccatggtggtggccaagctgctggagaagcgacagacg
gagatcgaggccgagcgctgtggggagtcggaggtggtagatgagaagggctccgtgtcc
tcggggtctctctcggccgccaccatgcctgtcttccaagacgtcctcctccagttcctg
gacacgcaggccccaatcctcactgatccggccaacgacagcgagcgggtggagttctcc
aatctggtgctgctcttctgcgagctcatccgccacgatgtgttctcccacaacatctac
atgtgcaccctcatctcccgcggcgatctggccagcgactcgcacttaccccgcccccgc
tcccccagcgatgagccgtcggacgactcggagcgcaaagagcaggacgccggcagtagc
gtcaaaatggaggacactggcttgtcggagtcgatggagatcgatcacaactccagcgcc
aactttgacgagatgttctcgcctccaatgcacgagtccaaggggagcccctccccagag
aagccttcagagggccacggggccccagagcaggagagcaagagcacaggcaaggacaag
ggcctggaccccgccttcccccaggtgtacgaccagccccgccacatccagtacgccaca
cacttccccattccacaggaggagagcgccagccacgagtgcaaccagcggctggtggtt
ctgtacggcgtggggaagcagcgtgacgaggcgcggcacgccatcaagaaaatcaccaaa
gacatcctgaaagtgctcaaccgaaaangtaccgccgagacgggaggagaggaagggcag
aagaggaagaggagtaaacccgaggccttccccactgccgaggacattttctccaaattc
cagcacctttcacactttgaccagcaccaggtcacctctcaggtgtccaggaacgttctg
gaacagatcaccagctttgccttagggatgtcctatcatctacccctcgtccagcacatc
cagttcatctttgacctcatggagtactccctcaacattagtggcctcattgactttgcc
atccagctgctgaacgagctgagtctggtggaggccgagctgctgctgaagtcctccagc
ctggtgggcagctacaccacgggcctgtgcctgggcatcgtggccgtgctgcgccgctac
cactcctgcctcatcctcaaccccgaccagaccgcgcaggtcttcgacgggttgcgtatc
gtggtgaagtctggcgtgaacccggcggactgctcctccgcggagcgctgcatcctggcc
tacctgtatgacctctacacctcctgcagtcatctcaagagcaagtttggggagatcttc
agcgagttctgctccaaggtgaagaactccatctactacaacatcgacccgtccgactcc
aacatgctgtgggaccaggccttcatgatcgaagccatcgccaacccgtcggcccacaac
ctcaaccactccatggtgggccagctgctcaacgacagcgccgccaaccgctacagcttc
gtgtgcaacgtgctgatggacgtctgtgtggaccaccgcgaccccgagagggtgaatgac
attggcatcctgtgcgccgagctgacggcctactgccgctccctgagtgccgagtggctg
ggcgtcctcaaagccctctgctgctcctccaacaacggaaactgtggcttcaacgacctg
ctgtgcaacgtcgatgtgagtgacctgtccttccacgactccctggcgaccttcgtggcc
attctgatcgcccgccagtgtctcctcttagaagatcttgtgcgctgtgtggccatcccc
tcgctgttaaacgcagcttgcagtgaacaggactcagaacctggtgctcggctcacctgc
aggattctgctgcatctgttcagaacgcctcaacgcaacccctgcccacaggatggcaag
tcagacaagtcctctgttgggatccggtcgtcgtgtgatcgccacctcctcgctgcgtct
cagaacagcatcgtggttggagctgtctttgctgtgctgaaggctgtcttcatgctgggt
gacgctgaactgaaaggctccggcttctcacaccccactgggctagacgacatcggagat
gacgacatcggctccaagaaatctggcggtcgaaacgtctccatagaaactgccagcttg
gatgtgtacgccaagtacgtgctgaagagcatttgtcaacaggagtgggttggcgagcgc
tgtctgaagtctctgtctgaggacagcagtgccctgcaggacccggtgctggtcaacatc
caggcccagaggctcctgcagctcatctgctacccgcaccggcagctggacagcgaggag
ggggacaacccccagcgccagcgcatcaagcgcatcctccagaacatggatcagtggacc
atgaggcagtcttgcctggagctgcagctcatgatcaagcaaagcacaaacaatgaactc
tactccctgctagagaacatcgccaaggcaaccatcgaggtgttccagaagtcggcggag
atgaactccagtaacctctcagggaatggctccgccatctcaggcagctctgtttccaac
agcaacaacaccagcaagctcaaacctgtcctcagttcatccgagcgctcgggcgtgtgg
ctggtggcccccctgatagccaagctgcccacctcggtgcagggccacgtactgaaggcg
gccggcgaggagctggagaagggccagcacctaggatcctcttcgcgcaaggagagggac
cggcagaagcagaagagcatgtctctcctgagccagcagcccttcctgtctctggtgctg
acgtgtctgaagggtcaggatgagcagagggagggccttctcacctccctctacagtcag
gtgcagcagatcgtccacaactggcgtgaagaccagtatcaggacgactgcaaggccaag
cagatgatgcatgaggcgcttaagctccggctcaacctggtgggtgggatgttcgacacg
gtccagcgcagcacacagcagaccacagagtgggcggtgcttctgcttgacatcatcagc
agtggaacagttgacatgcagtccaacaatgagttgttcaccaccgtgctggacatgctg
agcgtgctgatcaacggcaccctggcggcggacatgtccagcatctctcagggcagcatg
gaggagaacaagagggcctacatgaacctggtcaagaagctcaggaaagagctgggtgac
cgtcagtcggagagtctggagaaagtgcgtcagctgctgcccctgcccaagcagacccgt
gatgtcatcacctgtgagccccagggctcgctcatcgacaccaaaggcaacaagatcgcc
ggcttcgagaaagagggtctccaggtgtccaccaagcagaagatctccccgtgggacgtg
ttcgagggcctcaagcactcggcgccgctttcctggggctggttcggcacggtgcgcgtc
gaccgcaaggtcaccaagttcgaggagcagcagcggctgctgctctaccacacgcacgtg
aagcccaagccgcgcagctactacctggagcccctcaacctgccgcccgaggaggaggag
ccgcccacgcccgtgccccaggagcccgagaagaagatggccgaagcggtcaaggccgag
aagaacgtctccaccgtgccggccgagcccaacaagaagaagtccaagaagaagaagcag
ccgcccgccgctaaagtggaggactatggtgcccgcaacccagcggtggtaccctatcca
ggaggaatgtctcaggacgtgatgatgagccagcagcctctctacaatcgcatgggttac
aaccaagccccgatgaacatgtatgctcagaaccaacccctgccaccaggaggccccggg
ttggacagcccttacaggccgcgcaacatgcaaccgaaacaagctatgcctactcggccc
acctaccctggcatggtgcagatgccgggcagcatgccgggaatgatgccggggatgcag
aaggatcagtttccgatgggctacaagccacaggcgcccatggctcacaaccagatgctg
cggcagcaactccaggtcagattgagccaaatgcagatgagacagatgacctccaatcca
cagtattcatcaatgcagcaatcacagggcatctcccagggctaccccaactatggggct
ctgatggggggcatgcagtcgcacccctcgcagccagggggcatagtccctccctcatac
aaccagaattttcagggcaaccaccctggcaccaacccgggggggatggacaccctgaga
cagatgccccagagacccagcggctacgttcaccagcaggcccccggaggctacccacac
cccatgcagaacccccagaggttccagcatcaggccatgcagcagtcgcagctcatgcac
ggcggccacttgggcggcggtcagggcgtgcaccccaccatgcggcccaaccagatgctg
gagcagcagcagcagcagcagcagcagcagcagcaacaacaacaacagcaacaacagcaa
caacaggcgcagcagcagcagttcctgcgacagcagcaggctctccgggtccagcagcag
cagcaggtccagcagcagcaggtccagcagcaacaacaacaacagcaacaacagcagcaa
caacagcagcaacaacagcagcagcagcagcaacagcagcaggtccagcagcagcagcag
gtgcagccacagcaggtacagccgcagcaggtctctgcagcgcaggcacctgcacaggtg
cagcagaaccaggccctgggcatgcaggcgctgccgccgcaacaacccatgtttccacgg
cagggtatgcagcagacccagcaacagcaacagacagcagccctggtcagacagctccag
cagcagctgtcaaatacacaacctggacagaacacagctccctattactga
DBGET
integrated database retrieval system
