KEGG   Clupea harengus (Atlantic herring): 105908082
Entry
105908082         CDS       T09045                                 
Symbol
rhoca
Name
(RefSeq) ras homolog family member Ca
  KO
K04513  Ras homolog gene family, member A
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04081  Hormone signaling
char04144  Endocytosis
char04150  mTOR signaling pathway
char04270  Vascular smooth muscle contraction
char04310  Wnt signaling pathway
char04350  TGF-beta signaling pathway
char04510  Focal adhesion
char04520  Adherens junction
char04530  Tight junction
char04621  NOD-like receptor signaling pathway
char04625  C-type lectin receptor signaling pathway
char04810  Regulation of actin cytoskeleton
char05100  Bacterial invasion of epithelial cells
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    105908082 (rhoca)
   04350 TGF-beta signaling pathway
    105908082 (rhoca)
   04150 mTOR signaling pathway
    105908082 (rhoca)
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    105908082 (rhoca)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105908082 (rhoca)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105908082 (rhoca)
   04520 Adherens junction
    105908082 (rhoca)
   04530 Tight junction
    105908082 (rhoca)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    105908082 (rhoca)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    105908082 (rhoca)
   04625 C-type lectin receptor signaling pathway
    105908082 (rhoca)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    105908082 (rhoca)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105908082 (rhoca)
   05100 Bacterial invasion of epithelial cells
    105908082 (rhoca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105908082 (rhoca)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105908082 (rhoca)
   04031 GTP-binding proteins [BR:char04031]
    105908082 (rhoca)
Membrane trafficking [BR:char04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    105908082 (rhoca)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105908082 (rhoca)
  Exosomal proteins of other body fluids (saliva and urine)
   105908082 (rhoca)
  Exosomal proteins of colorectal cancer cells
   105908082 (rhoca)
  Exosomal proteins of bladder cancer cells
   105908082 (rhoca)
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    105908082 (rhoca)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB VASP_tetra
Other DBs
NCBI-GeneID: 105908082
NCBI-ProteinID: XP_012692005
Ensembl: ENSCHAG00000011323
UniProt: A0A6P3W811
LinkDB
Position
5:11388503..11413397
AA seq 193 aa
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKPEEGRDMANRISAFGYLECSAKTKDGVRDVFEMATRAALQ
VRKRKKRSGCLLL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggctgccatccggaagaagttggtgatcgtgggtgatggagcgtgtggaaagacctgt
ctcctcatcgtcttcagcaaggaccagttcccagaggtgtacgtgcccaccgtctttgag
aactacatcgctgacatcgaagtggatggcaagcaggtggagctggcgttgtgggataca
gcaggacaggaagactatgacaggctgaggcccctctcctaccccgatacagacgtcatc
ctcatgtgcttctccattgacagccctgacagtttagagaatattccggagaagtggact
cctgaggtgaagcacttctgccccaacgtccccatcatcctcgtggggaacaagaaggac
ctgaggaacgacgagcacacgcgacgggagctggccaagatgaaacaggagccggtgaag
ccagaggagggccgggatatggccaaccgcatcagcgccttcggctacctggagtgctcg
gccaagaccaaggatggcgtgcgtgacgtcttcgagatggccacaagggcggcgctgcag
gtgcgcaagcgcaagaagaggagtggatgcctcctgttgtga

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