Clupea harengus (Atlantic herring): 105908106
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Entry
105908106 CDS
T09045
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00071
Fatty acid degradation
char01212
Fatty acid metabolism
char03320
PPAR signaling pathway
char04148
Efferocytosis
char04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
105908106
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105908106
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105908106
03320 PPAR signaling pathway
105908106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105908106
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
105908106
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105908106
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
105908106
NCBI-ProteinID:
XP_031424929
Ensembl:
ENSCHAG00000021269
UniProt:
A0A6P8FGN2
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Position
6:complement(13335292..13348494)
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AA seq
774 aa
AA seq
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MAEAHQAVAFQFTVSPEGIDLQLSHEALRQIYLSGVYSWKKRFVRFKNGVLTGVYPGSPT
GLMLVLAGHIGRAKYFQADPSLGLFSLLENHLPISRYMSPETQQLVGGVLVGTGLWVGIF
FVMRTGLKALLSWHGWMHVARGTIPLKVRLWMVLVRLFSGQRNPMLYDFQTSLPRLPLPS
VKDTMRRYLESVRPLLSDDEYSRMEGLSKDFEKNLGPRLQWYLRLKAWWSTNYVSDWWEE
YIYLRGRGPIMVNSNYYAMDFLYVFPTHRQAARAGNAIHLIMLYRRQLDRAQIKPLMLQN
TIPMCSSQYERMFNTSRVPASPDGDMLQHHTNSKHIVVYHKGRYFKVWMFYDGRLLMPRE
IEQQMECILADDSPPQDGEEELAALTAGDRVPWACARDAYFRHGRNRQALDAVEKAAFFV
TLDDTEQRYDAEKPLESLGNYAKSLLHGKCHDRWFDKTFNLIVFKNGTMGLNAEHSWADA
PIIGHLWEHVLSSDPIKLGYTEEGHCNGTPHANMPGPMRLQWSIPTECQTMISNSLVRAK
ALADDVDIIIIPFHDFGKGLIKKCRTSPDAFIQIALQLAHFRDKGRFCLTYEASMTRLYR
EGRTETVRSCTVETCAFVRAMIDNEPKEKMMQLLKQAAEKHQQKYREAMTGKGIDRHLFC
LYVVSKYLGEDSDFLKEVLSQPWSLSTSQTPLQQVDLFDLAKYPEYVSSGGGFGPVADNG
YGVSYVIIGENLINFHISSKHSSAETDSKRFGDNIKKAMLDILGLFNLEAKPLK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcacatcaggctgtggccttccagttcactgtctcaccagagggcatcgac
ctccagctgagccatgaggccctcaggcagatctacctctctggcgtgtactcctggaag
aagaggtttgttcgcttcaagaatggggtcctgacaggtgtgtacccagggagccccact
ggcttaatgctcgtgctggcagggcacataggcagagccaagtatttccaagcagatcct
tcactgggccttttcagtctcctggagaaccacctccctatcagcaggtacatgtcccct
gagacccagcagctggtggggggtgtgttggtgggcacaggcctgtgggtggggatcttc
ttcgtcatgaggacggggctgaaggcgctgctctcctggcacggctggatgcatgtggca
cggggcaccatacctttgaaagtccgcctctggatggttctggtgcggctcttctctggt
caacgcaaccccatgctctacgacttccagacgtctctgccgcggttgcccttgccttct
gtgaaggacaccatgagaaggtatctggagtctgtgcggcccctgttgtctgatgatgag
tattcgcggatggagggattgtccaaagactttgagaagaatctggggccacgtctgcag
tggtacctgcgcctcaaggcctggtggtccactaactatgtgagtgattggtgggaggag
tacatctacctcagaggccggggccccatcatggtcaacagcaactactatgcaatggac
ttcctgtatgtgttccctactcaccggcaggcagcaagggcgggaaatgccatccatctc
atcatgctgtaccgcaggcaactggaccgcgctcagatcaaaccgctaatgcttcaaaac
accattcccatgtgttcatcccagtatgagcgaatgttcaacaccagtcgtgtaccagca
agcccagacggagatatgctgcagcaccacacgaacagcaagcatatcgtggtgtaccac
aaggggcgctatttcaaagtctggatgttctatgatggccgtctgctgatgcccagagag
atcgagcagcagatggagtgcatcctggccgacgactctcccccccaggacggagaggag
gagctggccgctctcactgccggagacagggtgccatgggcctgtgctcgtgatgcctac
ttcagacatggacgcaaccgtcaggcgttagatgccgtggaaaaggctgctttctttgtc
acccttgacgacactgagcagcgttatgatgcggagaagccactggagtcattgggcaac
tacgccaagtcccttcttcatgggaagtgccacgacaggtggtttgataagaccttcaac
ctgatcgtcttcaagaatggaactatgggactgaacgcagagcacagctgggcagacgct
cccatcataggacacctgtgggagcatgtgttatccagtgaccccatcaaactgggctac
acagaagaaggacactgcaatggcaccccccacgccaacatgcctggccccatgcgtctg
cagtggagcataccaactgagtgccagaccatgatcagtaactctctggtgagggccaag
gcgctggctgatgatgtcgacatcatcatcatcccgttccacgactttgggaagggtctg
atcaagaagtgcaggaccagccctgacgccttcattcagatagctctgcagctggcccac
tttagggataaagggcgtttctgtctgacgtatgaggcctccatgacgcgcctctacagg
gagggccgcactgagactgtccgctcctgcaccgtcgaaacctgtgccttcgtccgcgcc
atgatcgacaacgagcctaaggagaagatgatgcagcttctgaagcaggcagcagaaaag
caccagcagaagtaccgtgaggccatgacggggaagggcatcgaccgccacctcttctgc
ctctacgtcgtctccaaatacctgggcgaggactccgacttccttaaagaggtcctgagt
cagccgtggagtctctccaccagtcagactccactgcagcaggtggatctgtttgacctg
gccaagtaccctgagtatgtgtccagtggaggaggctttggaccggtggcagataatggc
tatggagtgtcatacgtgatcattggtgagaacctcatcaacttccacatctccagcaaa
cattcaagcgcggaaacggactccaagcggtttggcgacaacatcaagaaggccatgttg
gacatcctgggcctgttcaatctggaagcaaagcctcttaagtga
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