Clupea harengus (Atlantic herring): 105908127
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Entry
105908127 CDS
T09045
Symbol
hoxc5a
Name
(RefSeq) homeobox protein Hox-C5
KO
K09305
homeobox protein HoxA/B/C5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105908127 (hoxc5a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105908127 (hoxc5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
105908127
NCBI-ProteinID:
XP_012692059
Ensembl:
ENSCHAG00000016415
UniProt:
A0A6P3W845
LinkDB
All DBs
Position
5
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AA seq
240 aa
AA seq
DB search
MSSYVANSLFKQTSHEASAFTLHNHGYGSVPELHVPSGYCYGGLDHQHRGSFACPSSSNS
LRAGEMSSGPRGSPDNHTPRVEQSTGSPRGRLNTTGHSSLNLGLYGHKSEGATELSEMPT
GKTKGADETKVGTLQAVQPVGQAGHPSQTQGSEQPPQIYPWMTKLHMSHEPDGKRSRTSY
TRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLNERQIKIWFQNRRMKWKKDSKLKLKDPF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttacgtagccaactcgttgttcaagcaaacaagtcatgaagcgtccgccttc
actttgcacaaccatggttacggttccgtgcccgagctccacgtaccgtcgggctactgt
tacggagggctcgaccatcaacatcgaggttccttcgcgtgcccatcctcctctaactcg
ctccgtgcgggggagatgagctccggtccgcgtggcagtccggataaccacacaccgcga
gtggagcaatccactggatcgcccagaggccgccttaacaccactggtcacagctcccta
aatctcggactttacggccacaaaagtgagggggcaacggaactcagcgaaatgcccaca
ggcaaaacgaaaggcgccgacgagaccaaagttggaactttgcaagccgttcagccggtg
ggacaagccggccacccaagtcaaacccaaggcagtgagcagccgccgcagatctatccc
tggatgactaaactacatatgagccacgaaccggatgggaaacgctcaaggacgagttac
acccgctatcaaactctggagttggaaaaagagttccatttcaaccgctatctgacgcgt
cgaaggcgcatcgagatcgcccataccctatgtctgaacgagcgacagatcaaaatctgg
ttccagaatcggcgaatgaagtggaagaaggattccaagctcaaacttaaagatccattc
tag
DBGET
integrated database retrieval system
