Clupea harengus (Atlantic herring): 105908237
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Entry
105908237 CDS
T09045
Symbol
taf9
Name
(RefSeq) transcription initiation factor TFIID subunit 9
KO
K14535
transcription initiation factor TFIID subunit 9
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105908237 (taf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105908237 (taf9)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105908237 (taf9)
Coactivators
SAGA/TFTC/STAGA complex
105908237 (taf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
Histone
Bromo_TP
CENP-T_C
TAF10
LonB_AAA-LID
CBFD_NFYB_HMF
TIP49_C
Motif
Other DBs
NCBI-GeneID:
105908237
NCBI-ProteinID:
XP_012692167
Ensembl:
ENSCHAG00000027815
UniProt:
A0A6P3W890
LinkDB
All DBs
Position
14:17281637..17284664
Genome browser
AA seq
248 aa
AA seq
DB search
MASPKTIPKDAQVMIQILKDMGITEYEPRVINQMLEFTYRYVTTIIDDAKIYATHAKKST
VDADDIRLAIQCRMDQSFTSPPPRDFLLEVARQKNQTPLPLIKPYTGPRLPPDRYCLTAP
NYRLKSLQKKVTSSAGRITVPRLSVGAVSSRPSTPTLGTPSVQTVASKLGTPVSLTGQRF
TVQIPSSQASSVKSVTPSTPTVQNVLINPSIIGSKNILITTNMVSQNSAADSGSLKRKHE
DEDDYDTL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctaaaactatacccaaagatgcacaggttatgattcagattttgaaagac
atgggcattacagagtacgagcctagagtaatcaatcagatgctggaattcacgtacaga
tatgtaacaactatcatagatgatgccaaaatctacgcgacgcatgccaagaaatctact
gttgacgccgatgatataagactagcaatccagtgtcgaatggaccagtctttcacctcc
cctcctccacgagatttccttcttgaggttgctcggcagaagaaccagacccctcttcct
ctcattaagccttacacgggtccacggctccctcctgatcgctactgcttaaccgcaccc
aactatagactcaagtccctacagaagaaggtgacttcttcagcaggtagaatcacagtg
ccacggttgagtgttggagcagtgtctagcaggccgagcacacctactctcggcaccccc
tctgttcagacggtggcctccaaactggggacgccggtatcattaactggtcagcgtttc
actgttcagatcccctcctcacaggcttcatctgtgaagtcagttaccccatccacacca
acagtccagaatgtcctcatcaacccttcaatcattggctccaagaacatccttatcaca
acgaacatggtgtcccagaattcagcagcagactcgggctccctgaagaggaagcatgaa
gatgaagacgactatgacaccctttga
DBGET
integrated database retrieval system
