Clupea harengus (Atlantic herring): 105908250
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Entry
105908250 CDS
T09045
Symbol
igsf9a
Name
(RefSeq) uncharacterized protein igsf9a isoform X1
Organism
char
Clupea harengus (Atlantic herring)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
fn3
Ig_4
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
105908250
NCBI-ProteinID:
XP_031433465
Ensembl:
ENSCHAG00000019376
UniProt:
A0A6P8GAA3
LinkDB
All DBs
Position
12:6877853..6906417
Genome browser
AA seq
1673 aa
AA seq
DB search
MGQQRLHILLLTAAAFTLWPLYLAGGAEPSVRAKEGSAAVLGCSLAPVDVGAASPRHVVE
WVRQGFDIPILIKFGTYAPRVHPDYEGRVSLTGNSALSVGALRLEDQGRYECRILPLEQT
DKETRNGSWTLLSVYAPPIFTETSPPVVEALLGRPITLRCVVRGNPPPRVTWAKNGVLLK
QNNTEVRNGTVSFRSVTTEAAGEYKCQASNSEGNVSLVIQLKVKGPPVIRIPPKDLVLNI
SQKAQLQCQAEADPPNMTYVWQRQGENVHHIQSLKSRVKVLVDGTLLISRVTPEDSGNYT
CTPTNGLLTPPSASAYLIVRHPAQVLQMPQETYLPTGMGGAIPCPIRAEPPLLRVDWTKD
GKPLDLDTQYPGWTLSAQGSVVVATANDDAAGVYTCTPYNSYGTMGQSETTRVILQDPPS
FKVPPRKEYRQDVGRMLVIPCQAAGDPAPQVTWRKVGRSPSSSFTVAANGSLVLHPLSKD
HQGAWECSSSNRVATVNTSTTVLVLGTSPHAVPLLSVSAALTSANVSWEPGFDGGYTQKF
TIWLKRVASEADGEKQEWASVPVPPSAGTTLLVTGLLPSTDYQFSVLPQNKMGTGPFSDI
TSARTLDPKPVVMKLAPPTFLSANVTTGGVVMRWLAPHNQSPPIQGFVLQSRLQGGRWSN
LAEGISANHTQMLVQGLRKDSVYELRLLSQRGDEQSRPSASINISTAGLEASVSPASRGM
LQLVPEPLLAGVMGGLGLLCVALLLIIGVACVFRRRSAKRKRRDDLTPALLTSPCGTASA
AGGSPDSVLKHKLLPPSSLSSTSSSSASSPSDPSSFEQSGQGEYQQRGQPLPRHHPVSFP
ESTLSRGRDGGGGPLSALSALELISRGPDGRFSLETYAEIPLSHTHTPVRRNLHTDFSGL
SAGRGGIHKSHSLRSYREDRINRDAPFVVSVDLPPPEGTARVMAKHLSLQGHYLLGAQDL
SPSARGLPECSSLLSEGSGLDAYSNPEPEMQQGSFGYGSVKRNSGADNRPMAASLLVLQM
EHERERGNLSRCLTLAREREALERELRKYSKEEQEDDVDQEPELVWKTREGASPRDSLHA
SRGCSSLENSGRGNTRPSSCVLWEASPLSSPTRLVPVQKHPPPQQADGDWTGREGGQAKH
SLLTAGADLTLRKQRSFRQEPELRRVCVSPERLSVAGSLRQDYQEAISAESYTGTHRRAD
DFPGNPDECTFVEMSVDGPEIGEQYHTASSARCVAQSDQHGGRHTHTQRGSGQTSRTLSH
LDVLRPDLRKTGSLGSRRWNGFKSTQSLDYRKRGEFLTPDAWVHSISLDRASSASPFPFP
HQHEDEDLSGEPYRGTPNPHLRGTPNPPSRGTPNPPVSQSSDSRRSVRSLPSDRSPQPFP
VQPCGPRGGETPDPRRQASTFPQESMGDPDLPNTTQRGSPPHERRYPTPDSGNTPLNREH
PPPESGNSPLDRGHCPPDRRIPPNDKGHPSANRGHPRPDVVHPPPDSCGGAYGWLPAHWA
SIPGREEERGRGPEEKEAESQEVDAEIRAYRSTAESEGNYRSYASQSSGRGSMEPPSSLS
PPLISSPETTEESEHEEQVQWEGLKRRRTSSVDENYEWDTHYVPMKPVYVKSPQSQRSLE
GENRGHSCRTAEEMTSIGGEGMFPSVRMLKSGGSFSSTGLPHHHGAEPETVLF
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgggacagcagaggcttcatatcctcctgttgactgcagcagcattcacactttggccc
ctctatctggccggtggtgctgagccttcagtacgtgctaaagagggtagcgcagcggtg
ctggggtgcagtctggcacccgtggatgttggtgctgccagccctcggcacgtggtggag
tgggtgcgccagggcttcgacatccccatcctcatcaagtttggtacctacgcccccaga
gtgcaccccgactatgaaggccgagtgtctctgacggggaacagcgcactgagtgttggg
gcgctgcgtctggaggaccagggccgatatgagtgccgcattctccctctggagcagacg
gacaaggagacacgcaacggcagttggacgctcctctccgtctatgcgccccctatcttc
actgagacttcgccccctgttgtggaggccctgttggggaggccaatcacgctcaggtgt
gtcgtccgtggcaacccgccaccccgggtcacatgggctaaaaatggcgtccttctcaag
cagaacaacactgaggtgcgcaatgggactgtgtctttccggtcagtaaccacagaggca
gctggtgagtacaaatgccaggcctccaactccgagggcaacgtgagtcttgtgattcag
ctcaaagtcaaaggtccccctgttatccgaatcccacctaaggatttggtcctcaacatc
tcccagaaggcccagctacagtgccaagcagaggccgacccccccaacatgacgtacgtg
tggcagaggcagggggagaacgtccatcacatccagtctctgaagtcccgtgtgaaggtg
ctggtcgatggaacattgctcattagtcgcgtcaccccagaggattctgggaactacacc
tgcacacccaccaatgggctgctgactccgccctccgcctctgcctacctgatcgtcaga
caccccgctcaggtgctccagatgccccaggagacctacctgcccactggcatggggggc
gccataccctgccccatccgtgcagaaccgcccctgctccgcgtcgactggaccaaagat
gggaagcctctggacttggacacacagtatcctgggtggacgctgtcagcccagggctcc
gtggtcgtggcaacggccaatgatgacgcagcaggtgtttacacctgcactccgtacaac
agttatggaacaatgggccaatcagagaccaccagggtgattctgcaggaccccccctcc
ttcaaagtgcccccccgtaaggagtaccgccaggacgtggggcgcatgctagtgatcccc
tgtcaggccgccggagatccagctccccaagtcacctggagaaaggtggggcgctctcct
agttcttccttcaccgtggcagccaacggctccttggtgctgcacccgctaagcaaagac
caccagggggcgtgggagtgctcctcctccaacagggtggccactgtgaacactagcacc
accgtgctggtcctaggcacgagtccccacgctgtgcccctgctgtccgtctcggctgcg
ctcacctctgccaatgtgtcgtgggagccgggttttgatggcggatacacacagaagttc
accatctggctgaagcgtgtggcatctgaggcagacggggagaaacaggagtgggcatct
gtgcctgtgccaccctccgcgggcaccactctcctggtcacaggcctcctgcccagtaca
gactaccagtttagtgtcctgccacagaacaagatgggaaccggacccttcagcgacatc
accagcgccagaaccctagacccgaagccagttgtgatgaaactggctccaccgacattt
ctctcagccaatgtgacaacagggggcgtggtcatgcgctggctggccccccataaccag
agcccccccattcagggttttgtgcttcagtctcgtctgcagggggggaggtggtctaac
ctggccgagggcatcagtgccaaccacacccaaatgttggttcaggggctacgcaaggac
agtgtttatgaactgcggctgctgtctcagcgaggagacgagcagagtcgccccagtgcc
tccatcaacatctccaccgcggggttggaggcgtccgtgtccccggccagtcgcggcatg
ctgcagctggtccctgagcctctgttagccggcgtgatgggagggctgggcctgctgtgt
gtggctctgctgctcatcatcggggtggcgtgtgtgttccgccgtcgcagtgccaaacgc
aagaggagggatgatctcactcctgccctcctgaccagtccatgtggaacagcaagtgcg
gctggtgggagtccagacagtgtgctgaaacacaaacttcttcctcccagctccctctcc
tccacatcctcctcctccgcctcctccccctccgacccgtcctcctttgagcagtccggc
cagggtgagtaccagcagcgggggcagcccctgccccgacaccaccccgtctccttcccc
gagagcaccctcagcaggggcagagatgggggcggaggcccgctctcggccctctctgcc
ctggagctcatctcccgtggcccagacggccgcttctctctagagacgtacgcagagatc
cccctctcccacacccacacccccgtcaggaggaacctgcataccgacttctccgggctg
tccgcgggccgggggggcatccacaagtcccactcgctgcgctcctaccgcgaggatcgc
attaacagagacgctccgttcgttgtgtctgttgacctgcctccccctgagggcaccgcg
cgagtcatggccaagcacctgtccctgcagggccactacctcctgggagcccaggacctt
tcaccctctgccagggggcttccagaatgttccagcctgctctccgaaggcagcgggttg
gacgcgtattctaaccccgagcccgagatgcagcagggtagctttgggtacgggtcggtg
aagcgcaacagtggcgccgacaacaggcccatggccgcgagcctgctggtgcttcagatg
gagcacgagagagagaggggaaacctgagcaggtgtctgacgctggcgcgcgagagggag
gccctggagagggagctgaggaaatactccaaagaagagcaggaggatgacgtggaccag
gagcctgagctcgtgtggaagacacgcgagggagcctcgccgcgcgatagcctccacgcc
agcagggggtgctcctcgctggaaaactctgggcgaggcaacacgcggccctcctcctgc
gtgctgtgggaggccagccctctctcctctcctacccgcctggttccggtccaaaagcat
cctcctcctcagcaagcggatggggattggactgggcgagagggggggcaagccaagcac
tcactcctcactgcaggagctgatctgactctacgcaagcagaggagctttcgccaggag
ccggagctgcggcgtgtgtgtgtttcacctgagaggctttcagtggcagggtcactgagg
caggactatcaggaagccatcagtgccgagagctatacgggcactcacagaagggcagat
gatttccccggtaatccagacgagtgcacttttgtagagatgagtgtagatggcccagag
ataggggagcaatatcacacggcctcatctgctaggtgtgtggcacagtcggaccagcac
ggaggcagacacacacacacacagagaggcagtggccagaccagcaggactctgtcccac
ctggacgtgcttcgacccgacctgaggaagaccggcagcctggggtcacggcgctggaac
ggcttcaagagcacccagagcttagactaccgcaagaggggggagttcctcacgcctgat
gcctgggttcactccatcagcctggacagagccagctccgcgtcccctttccctttccca
caccagcacgaggatgaggacctcagtggagagccctacagggggaccccaaatccccac
ttaaggggtaccccaaaccctccatccaggggcaccccaaaccctccagtttctcagtca
agtgattctcggcgttctgtgagatcccttccatcagataggtccccccagcctttccca
gtgcagccctgtgggcctcgtggaggtgaaactcctgacccccgtcgccaagcctccaca
tttccccaggagtctatgggagacccagatctcccaaacacaacacagagaggcagccct
ccccacgagagaaggtaccccacacctgacagtggaaacactccactcaacagagagcac
cccccacctgaaagtggtaactccccacttgatagagggcattgcccacctgacagaagg
atccctccaaacgacaaagggcacccttcagctaatagagggcacccccgacctgacgta
gtgcacccccctcccgacagctgtgggggggcgtacggctggctgcctgcccactgggcc
tccattcctggcagagaggaggagaggggcagggggccagaggagaaggaggcggagagc
caggaggttgacgctgagatcagagcctaccgcagcactgccgagtcagagggcaattac
cgtagttacgccagccagagtagcggccgcggcagcatggagccgcccagcagcctgagc
ccccccctcatcagctcccccgagaccacagaggagagcgagcatgaggagcaggtccag
tgggaagggctgaagaggagaaggacaagctcggtggacgagaactatgagtgggacaca
cattatgtccccatgaagcctgtgtatgtgaagtcaccacagtcacagcgcagcctggag
ggggagaacaggggtcactcctgcaggaccgccgaggagatgaccagcataggaggagag
ggcatgttcccttccgtcaggatgctgaaatcaggtgggagtttctcttccactggtctc
ccccaccaccatggcgctgagcctgagaccgtgctgttctga
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