Clupea harengus (Atlantic herring): 105908290
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Entry
105908290 CDS
T09045
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105908290 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105908290 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
char04030
]
105908290 (ptafr)
G protein-coupled receptors [BR:
char04030
]
Rhodopsin family
Others
Platelet activating factor
105908290 (ptafr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
7TM_GPCR_Srx
Frag1
7TM_GPCR_Str
Motif
Other DBs
NCBI-GeneID:
105908290
NCBI-ProteinID:
XP_031436700
Ensembl:
ENSCHAG00000027746
UniProt:
A0A6P8GPG7
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Position
14:16671331..16675348
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AA seq
352 aa
AA seq
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MENSTSSNAQFLDSEFRYTLFPVFYGIVFVLGLGANSYALYVLRYLRDARAMNEVRIYMT
NLTVADLLFVAALPFWISYYARGGDWIFGDPLCRITGSLFFINTYCSVLFLCVISINRFW
AVTRPLQAAKSDHWRRGVCVSVAVWAGTLLATIPYLAAPGVQMDGNKSRCLEGYQNENTN
KRAGVAATHFVIIGLFFVVFLVVMVCNVLIARVLLTQPLIKERSIVQNTSGGNSSKVRPS
GTKRRALRMLCAVVTIFAVCFLPHHVVQGPWTLVVLGMADNWSQSTKQRLNDAHQVTIML
MGLNCMLDPVVYCFATSKFRQYVKGHFNMFKKGRACNTQTTTMTHISMANKN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcaacctcttcaaatgcacagttcctggactcagagttccggtacactctg
ttccccgtgttctacggtatagtgtttgtcctggggctgggtgcgaacagctacgcgctg
tacgtcctgcgatacttgcgagacgcgcgcgccatgaacgaggtccgcatctacatgacc
aacctgacggtggccgacctgctctttgtcgccgccctgcctttttggatcagctactat
gcccgtggtggcgactggatcttcggtgaccccctatgcaggatcaccggctcactcttc
ttcatcaacacttactgctccgtcctcttcctctgcgtgatcagcatcaaccgtttttgg
gcagtgacgcgcccgctgcaagccgccaagtcggaccactggaggaggggcgtgtgtgtg
tctgtggcagtgtgggcaggcacgttgttagccaccatcccctacctggccgcacctggt
gtgcaaatggacggcaacaagagccgctgcctggagggctaccagaacgagaataccaac
aaacgtgcgggagtggccgctacgcactttgtcattatcgggctgttcttcgtagtcttt
ctggtggtcatggtttgtaatgtgctgatcgctcgagttctgctcactcagcctctcatc
aaggagcgctccatagtgcagaacacgtctggcggcaacagctccaaggtccggccaagt
ggcaccaaacgccgagcgttgcgcatgctgtgtgccgtcgtcacaatcttcgccgtgtgc
ttcctgccgcaccacgtagtacagggtccctggaccctggtggtgctgggtatggcagac
aattggtcacagagcaccaagcagcgcctgaatgacgcccaccaggtcaccatcatgctc
atgggtctcaactgcatgctggaccccgtggtgtactgcttcgctaccagcaagttccgc
cagtacgttaagggccacttcaacatgttcaagaagggcagagcatgcaatacccagacc
accacaatgacccacatctctatggcaaacaaaaattaa
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