Clupea harengus (Atlantic herring): 105908386
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Entry
105908386 CDS
T09045
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a isoform X1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
105908386 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105908386 (cnga1a)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105908386 (cnga1a)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
PaO
Motif
Other DBs
NCBI-GeneID:
105908386
NCBI-ProteinID:
XP_031416094
Ensembl:
ENSCHAG00000024031
UniProt:
A0A6P8EV78
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Position
22:complement(9566256..9570361)
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AA seq
627 aa
AA seq
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MTSTRRGHGAMQPPHTVISHISEETEKEGNRRPLRSPCHLNTNNNNNNNNNNNEEPKEPF
VVNPGGGLYNYWLLIITIPVSYNWTMIIARSCFEELQHRHLFLWFFLDYTSDLVYLADMA
VRARTGYLEQGLLIKDTKKLLAEYMSGTQFKLDAISMLPTDLLYFYLGLDYPEIRMNKLL
RLNRMFEFFQRMETKTNYPNILRISTLVMYIIIITHWNACIYYSFSKFIGFGSDPWVYPS
LDEDEYGELLTKYAYSLYWSTMTMTTIGEMPPPEVDSEFFFHTADFLAGVFIFATIVGNV
ASMISNMNAARANFQARIDNIKQYMHVRKVDQDLENRIITWFDYMWNNNRSQDEREVMRY
LPDKLRAEIGISVHLETLKKVRIFADCEAGLLIELVLKLRAVIFSPGDYICKKGDIGREM
YIIKEGKLAVVADDGVTQFVVLGEGSYFGEISILNIKGSKAGNRRTANIRSVGYSDLFCL
SKDDLMEALQEYPEAKTGLEDKGRQILLKDNLIELDLSKLKPDEKDLESKVNSLYGSIEL
LKTKLSKVLKAHCRRRQALKERITMMERYTGEVAEDSEDEEEEKADAETEQAEKEGETEE
ERKEGEVEGGRDEVAEKEEDTGEGEKK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccactaggagaggtcacggggctatgcagccgcctcacacagtcatctcccac
atctctgaggagacagagaaggaggggaacagacgccctttgcgctccccatgccacctc
aacacaaacaacaacaacaacaacaacaacaacaacaatgaagaaccaaaggagccattc
gttgtcaatccaggagggggcctctacaactactggctcctcataatcacaatccctgtc
agttacaactggaccatgattatcgcaagatcctgttttgaggaactccagcacaggcat
ctgttcctctggttttttctggactacacctcagacctggtgtacctggctgacatggct
gtgcgagcaagaacaggttacctggagcaaggtctgctgatcaaagatacgaagaagctt
ctggctgaatacatgtctggcacgcagttcaaattggacgcaatttcaatgttgcccact
gatctcctgtacttttacttgggccttgactaccccgagatccgcatgaacaaactgctg
cggctcaaccgtatgtttgagttctttcagcgcatggagaccaagaccaactaccccaac
attctgcgcatcagcaccctggtcatgtatatcataatcatcacccactggaatgcctgc
atctactactccttctccaagttcatcggctttggctcggacccttgggtctacccctct
ctggatgaagacgagtatggagagctgttgacaaagtacgcctatagcctttactggtct
actatgacgatgaccacaattggtgagatgccgccacctgaggttgactcagagtttttc
ttccatactgccgacttcctggcaggtgtgttcatctttgccaccattgtgggtaatgtg
gcctccatgatttccaacatgaatgctgcaagagccaatttccaggcacgcatcgacaac
atcaaacagtacatgcatgtgcgtaaggtagaccaggacctggagaaccgtattatcacc
tggtttgactacatgtggaacaacaaccgttcgcaggacgagcgagaggtgatgcggtac
ctaccagacaagctgcgggcggagatcggaatcagtgtgcacttggaaaccctcaagaag
gtgcgcatctttgccgactgcgaggcaggcctcctgatagagcttgtgctcaagcttcgt
gccgtcatcttcagcccaggtgactacatctgcaagaaaggggacatcggccgggagatg
tacatcatcaaagaaggcaagctggctgtggtggccgatgacggggtcacacagtttgtt
gtcctgggcgagggaagctacttcggagagattagcatcctcaatatcaagggcagtaag
gcaggaaaccgtaggacggctaacattcgcagtgttggttactcagatcttttttgcctg
tccaaggatgacctgatggaggctctccaagagtaccctgaggccaagaccgggctggaa
gacaaaggccgacagatcctcttgaaggacaatctgattgagctcgacctgtccaagctg
aagccagacgagaaggacctggagagcaaagtgaacagcctgtacggcagcatagagctg
ctgaaaaccaagctctccaaggtgttgaaggctcactgcaggaggaggcaagcactgaag
gaacgcatcactatgatggaacgctacacgggagaagtggcggaagactcggaagatgag
gaggaggagaaagcagatgcagagaccgagcaggcggagaaggaaggggagacagaggag
gaacggaaggagggagaggtggagggtggcagagatgaagtcgcagagaaggaggaggac
acgggggaaggagagaaaaagtag
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