Clupea harengus (Atlantic herring): 105908424 Help Entry 105908424         CDS       T09045                                  Symbol pcdh18a Name (RefSeq) protocadherin-18a isoform X2   KO K16499   protocadherin delta 2 Organism char  Clupea harengus (Atlantic herring) Brite KEGG Orthology (KO) [BR:char00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:char04515]     105908424 (pcdh18a) Cell adhesion molecules [BR:char04515]  Cadherins   Protocadherins    105908424 (pcdh18a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 TMEM154 Cadherin_C_2 Motif Other DBs NCBI-GeneID:  105908424 NCBI-ProteinID:  XP_012692380 Ensembl:  ENSCHAG00000015168 UniProt:  A0A6P3W8S2 LinkDB All DBs Position 22:12078934..12085488 Genome browser AA seq 1139 aa AA seqDB search MDINRNCAFIFIRTLKLLVVMTLAQHVTGKTLKYQVYEEQKVGTVIARLKEDVADVLSKL PSSVALRFKAMQRGSTPLLSVREQDGEISIRSKIDREKLCEKNVNCSIEFDVLTLPTEHL QLFHVEVQILDINDNAPQFSRSVIPIEISESAAVGARIPLDSATDPDVGDNSLNTYSLTP ATDFFMIDILTRTDGAKYAELVVLRELDRETRSSYELQLIASDKGVPPKSGSTLLKINIA DSNDNNPVFEKPSYVINLLENSPLGSMIIDLNATDPDEGTNGKIVYSFSTHVSPKIQETF KINSDSGELTVIKKIDYETTNSFDIDIQAQDLGPNSMPAHCKVIIKVVDVNDNKPEISIN LMSPGNEEVAYISEGASVDTFVALVRVDDKDTGLNGEVTCRLHGQGHFRLQETYEKNYMI LTDITLDREKRSEYSLTVIAEDRGSPSQSTIKHFTVQVLDENDNAPQFEKSLYEVFKPEN NPPGAYLTSVVAVDPDQGLNGQVSYNILESLVEGSSVSTYVTVDPSNGAVYALRSFDRED VSRVVFTILAQDAGNPGLSSNVTMVLTLLDENDNPPFIVSPQLWNHTADVPVSRYTAAGQ VLTTIRATDKDAGANGELTCIIVAGNEAGYLTMEANTCEIRANISVEQIPVDHMEVTALV QDKGATPLTARAVLKFTIYENMDSSIHTHTADGGEASLDVSLIIIISLAAICAMLLTIMV AFAVRCGREKKDTHSYNCRVAESTYQHHPKKPARQIHKGDITLVPTVNGTLPIRAHHRSP ADSPVAERAQMSSRQSHHSRQSLNSLVTISSNHIPESFALELAHATQPVEGHYQPRPSFR GNKYSRNYRYGLQDMDKFSLKDSGRGDSDAGDSDCDMGRESPIDRLLGEGFSDLFHMDGH QRLHPAMRLCTEECRILGHSDQCWMPSVPSPASTSSDYRTNMYIPGEESSQEALVEDDQQ SVDSTGDRKKSFSTFGKESEEDCGMGGSLLSEMSSVFQRLLPPSLDTYGECNEMAERTIA MENHRGFLPGKLSSSSSTYPQGVAAWAANTHFQNPSNTSANHVATPTHGPTNHVTATTQT HLKWLPAMEEIPENYEEDELDSMLGHLQGKRSDSRHEVTMDAGELVAEINKLLVDVRQS NT seq 3420 nt NT seq  +upstreamnt  +downstreamnt atggatatcaacaggaactgcgcgtttatttttataagaacattgaaacttcttgtggtg atgacactggcccaacatgttactggtaagacacttaagtatcaggtttacgaagaacaa aaggttggaactgttattgcacgactaaaagaggatgtagctgatgttttatcgaaactt cccagctcagtagctttgcgtttcaaggcaatgcaaagagggagcacacccctactgtct gtgcgcgaacaagacggcgagatcagcatcaggtcaaaaatagacagagaaaaactgtgc gagaaaaatgtgaactgttctatcgaatttgacgtgttgaccctccctacggaacatttg cagttgttccacgtcgaagtacaaatacttgacatcaatgacaacgctcctcagttttcg cggtcagtaattcctatagagatttctgaaagtgcggctgtaggcgcacggattcccttg gacagcgcaacggaccctgatgtcggagataactctcttaacacatactctctgacccca gcgacggactttttcatgattgatatcctcacacgaaccgacggtgccaaatatgcagag ctcgttgtgcttagggaattggacagagagacacggtcaagctatgaacttcaattaata gcctcggataagggcgttccccccaaatctggctcaacgctcctcaaaatcaacattgcg gactcaaacgacaacaaccctgtctttgagaagccatcttatgtgattaatttattggaa aattcacctctcggctccatgataattgatctgaacgccacagaccctgacgagggcacc aatggaaaaattgtctattctttcagtactcatgtttccccgaaaattcaggagacattt aaaattaactcagacagtggggaactgactgtgattaaaaagattgactatgagaccacc aactcttttgatattgatattcaagcacaagaccttggccccaattcaatgccagcacac tgtaaggtcatcatcaaagttgtagatgtgaacgacaacaagccagagatcagcatcaat ttaatgtcaccaggaaatgaggaagtggcatacatatctgaaggtgcgtctgtggacact tttgttgccctggtgagagtggatgacaaggacaccgggctgaatggagaggtgacatgt aggcttcatgggcaaggacacttccggctccaggagacctacgagaaaaactacatgata ctgaccgatatcactctggacagggagaagaggtcagagtacagcctcacagtgatcgca gaggaccgtggttcacccagccagtccaccatcaaacatttcacagtgcaggtcctggac gagaatgacaacgcaccacagttcgaaaagagcctctacgaggtcttcaagccagagaac aatccgccaggggcatacctcacctctgtggtggccgtggaccctgaccagggcctcaat ggccaggtgagctacaacatcttggaaagcttggttgagggcagttctgtctccacctac gtgaccgtggatccatccaatggtgctgtttatgcactccgctcatttgaccgtgaggac gtgagccgagttgtcttcaccatcctggcccaggacgctggaaacccaggcctgagcagt aacgttaccatggtgctgacactgttggacgagaacgacaacccgcccttcatcgtctcc ccccagctatggaaccacacagccgatgtgcctgtctcccgctacaccgctgcaggccag gtgctgaccaccatccgggccacggacaaggacgccggagccaacggcgagctcacctgc atcattgttgctggcaacgaggccggctacctcactatggaggccaacacgtgtgagatc cgtgccaacatcagcgtggagcagatacctgtggatcacatggaggttacagctctggtt caggataagggggcaacgccactgaccgccagagctgtgctgaagttcaccatctacgaa aacatggacagctccattcacacgcacacagctgacgggggggaggcctcccttgacgtg tccctgatcatcatcatctctctggcggccatctgtgctatgctccttaccattatggtg gcctttgcggtccgctgtggccgtgagaagaaagacactcattcctacaactgccgggtg gcagagtccacctaccagcatcaccccaagaagcctgccaggcagatccacaaaggcgac atcactctagtgcccacagtcaatggaaccctacccatccgggcacaccaccgctctccg gcagattcgcccgtggcagagagggcacaaatgagcagtcggcagagccaccatagccgc cagtcgctcaacagcctggttaccatttcatccaatcacatcccagagagctttgccttg gaactggcccatgctacccaacctgtggagggccactaccaaccaagaccaagtttccga ggaaataagtactcaaggaactacaggtatggcctccaagacatggataagttcagcctt aaggacagtgggaggggggacagcgatgcgggggacagtgactgtgacatgggtcgggag tctccgattgaccgtctcctcggcgaaggattcagtgacctctttcacatggatggccac cagcgactccacccagcaatgagattgtgcactgaagagtgtcgcatcctgggccattcc gatcagtgttggatgccctccgtcccatccccagcctctacctcctctgactaccgcacc aacatgtacatcccaggggaggagtcctcgcaggaagccctggtggaggacgaccagcag tctgtggactccactggtgatcgcaagaagagcttttccacctttggcaaggagtccgag gaggactgtgggatgggaggctctctcctctcagagatgagcagcgtgttccagcgcctc ctgcctccatcccttgacacgtacggggagtgcaacgagatggctgaacgcactattgcc atggagaaccaccggggcttcctccctggcaagttgtcatcctcctcttccacgtacccg cagggtgtggctgcctgggctgccaacacgcacttccagaacccgagcaacacgtcagcc aatcacgtggcgaccccgacacacgggccaaccaatcacgtgacggccaccacccagacg cacctgaaatggctgccggctatggaggagatcccagagaactacgaggaggacgagctg gacagcatgctcgggcacctgcaaggtaaacgcagtgacagtcgccacgaggtcaccatg gacgccggcgagctcgttgccgagatcaacaaactcttggtcgatgtccgtcagagctag

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