Clupea harengus (Atlantic herring): 105908425
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Entry
105908425 CDS
T09045
Symbol
pld1a
Name
(RefSeq) phospholipase D1a
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00564
Glycerophospholipid metabolism
char00565
Ether lipid metabolism
char01100
Metabolic pathways
char04144
Endocytosis
char04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
105908425 (pld1a)
00565 Ether lipid metabolism
105908425 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105908425 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
105908425 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105908425 (pld1a)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
105908425 (pld1a)
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
105908425 (pld1a)
Endosome - Golgi transport
Others
Others
105908425 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc
PX
PLDc_2
PH
DUF3785
DBD_HTH
Motif
Other DBs
NCBI-GeneID:
105908425
NCBI-ProteinID:
XP_012692381
Ensembl:
ENSCHAG00000010029
UniProt:
A0A6P8ES42
LinkDB
All DBs
Position
22:8340619..8375123
Genome browser
AA seq
1036 aa
AA seq
DB search
MAQAPEPTSSNMNLITADMNDTVDSLDTRELDFGDEEEVDFDHTGDTRIPFKAVYQTLGF
KESEAKVFLVSMPITARILEVERFTAAHDRFTQRSASKLPAVFKIELRHGNFTWEVKRKQ
KHFVELHRELLRYKTLMRIPLPSRSHTVRRKSIRRSEARQMPNLPRGGGGDDMGREEQVS
SRRRQLEDYLNKLLKMSMYRQYHATMEFIDVSQMSFIHDLGPKGLEGMILKRSGGHRIPG
LNCCGQGKVCYRWSKRWLVVKDSFLLYMKPDTGAISFVLLLDKEFTVEMDSKNTETRHGV
RINSLCRTLVIKCNSYRHALWWGQSIENFVRKHGKAFLRDHRFGSFAREEENIPAKWYVN
GKTYMEDLANAMEEAREEIFITDWWLSPEIFLKRPVVEGNRWRLDCILRRKAQQGVRIFV
MLYKEVELALGINSEYSKRTLMHLHPNVKVMRHPDHVSSSVYLWAHHEKIVVIDQSVAFV
GGIDLAYGRWDDREHRLTDVGSVTRAVTMALEQPADAPSQEVASSEDTAQNNGRTVGGGV
NPVEEPKIKGIGRMRKSRFSLYRHLHRHGLHHADSVSSVDSTEDRGGSMRSLQTGGGELI
GNTRFWHGKDYCNFVYKDWVQLEKPFDDFIDRHTRPRMPWHDIASVVHGKGARDVARHFI
QRWNFTKIMKPKYRSLSYPFLLPKSHTSANDLRYQVPGCVQAKVQILRSAADWSAGIKYH
EESIHNAYTQVIAKSKHFIYIENQFFISCADNKQVYNKIGDAIIERILRAHKENKKFRVY
VVTPLMPGFEGDITTGGGNAIQAVMHFNYRTMNRGDHSIISQLKKEMDNQWMNYISFAGL
RTHAELEGRLMTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIVEDTETVP
SLMDGEEYQAGKFALGLRLECFKTILGAFSDPNIDVSDPISDHFYKEVWMAISGRNATIY
DKVFNCLPSSLVRNMQELLDFKTRTELDKEDPAQARELLKKIRGFLVQFPLEFLSEENLM
PSMGTKEAMAPTELWT
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcgcctgagcccaccagcagtaacatgaacctgatcaccgcagacatgaac
gataccgtggatagtctggacacccgagagctagactttggggatgaggaggaggtggac
tttgatcacacgggggacacccggattccctttaaagccgtgtaccagaccctgggcttt
aaagagtccgaggccaaggtctttctggtgtccatgcccatcactgccaggatcctggag
gtggagcgcttcactgcagcccacgaccgcttcacccagaggagtgcgtccaagctgcca
gctgtgtttaagattgagctgcggcatggtaacttcacttgggaggtgaagcgaaagcag
aagcactttgtggagctgcacagggagttgctgcgctacaaaaccctcatgaggatccct
cttccgtcccgcagtcacacggtgaggaggaagagcatcaggaggagcgaggcgagacag
atgcccaacctgccacgtggaggagggggggacgatatgggcagagaggagcaggtgtcc
agcaggaggagacaactggaagactacctgaataagctgctgaaaatgtctatgtacaga
cagtaccatgccacaatggagtttatcgatgtgagccagatgtccttcattcatgacttg
ggaccaaaaggcttagaggggatgatcctcaaaaggtctggtggccatcgcatcccagga
ctgaactgctgtggccaaggcaaagtctgctaccgctggtcaaaaaggtggctggttgtc
aaggactctttcttgctgtacatgaagcctgacacaggagccatctcttttgtgctcctg
ctggacaaggagttcacggtcgaaatggactccaaaaacacagagactcgccacggggtg
aggatcaacagcctttgtaggacgctggtgatcaagtgcaatagttacaggcatgcactc
tggtgggggcagtcaattgagaactttgtgcggaagcacggcaaggcattcctcagagac
catcgcttcggctcctttgccagagaggaggagaacatcccagcaaaatggtatgtcaat
gggaaaacctacatggaggatctagccaatgctatggaggaggcaagagaggaaatcttt
attacagattggtggttgagcccggagatcttcctcaagaggccggtggttgagggcaat
cgttggcgcttagactgcatcctcagacgcaaggcacaacaaggggtgaggatttttgtc
atgctgtacaaggaagtggagctggcacttggcattaacagtgaatacagcaagcggaca
cttatgcacctacaccccaacgtcaaggtgatgagacatcctgatcatgtctcctcctcc
gtttatctgtgggcacaccatgaaaaaattgtggtcatcgaccaatccgtggccttcgtt
ggtgggatagatctggcctatggccgctgggatgacagggagcaccgactgacagatgta
gggagtgttacccgagctgtcaccatggcgcttgaacagcctgcagacgcacccagccag
gaagtggcctcctcagaagacacagcccagaacaatgggcggacggtaggaggaggggtg
aaccctgtggaagagcccaaaatcaagggcataggccgcatgcgcaagagccgcttcagc
ctctaccgccacctccaccggcacggcctccaccacgcagacagcgttagcagtgtggac
agcacagaagaccggggaggctcaatgcggagcctccagacaggcggaggagagctgatt
ggaaacacgcgcttctggcacggcaaagactactgcaactttgtctacaaagactgggtc
caactagagaagcctttcgatgattttatcgacaggcacacaaggcccaggatgccctgg
catgacattgcctcagtagttcatgggaagggggctcgggatgtggcaagacattttatc
cagcgctggaacttcacgaagatcatgaagccaaagtacagatcactctcctacccattt
ttactgcccaaatcacatacttcagccaatgaccttcgataccaagtgccaggctgtgtc
caggctaaagtgcagatcttgcggtcggctgcagattggtctgctggtataaagtaccac
gaggaatccatccacaatgcctatacccaggtcatcgccaagagcaagcatttcatctat
attgagaaccagttctttattagctgtgctgataacaaacaggtttacaacaagatcggt
gacgccatcattgaaaggatcctccgagctcacaaggagaataagaagttccgtgtctac
gtggtgactccgctgatgccaggctttgagggtgacatcaccaccggagggggaaatgcc
attcaggccgtgatgcatttcaactacagaactatgaataggggagaccattccatcata
tcacagctgaagaaggagatggataaccagtggatgaactacatctcttttgctggactg
cgcacacatgctgaactggaagggcgcctgatgacagagctcatctacgtccacagcaag
atgctcatagccgatgacaacaccgtcatcatcggctcagccaacatcaatgaccgcagt
atgctggggaagagagacagcgaggtggccgtgatcgtggaggacaccgagaccgtcccc
tcgctgatggatggagaggagtaccaggctgggaagtttgccctggggctcaggctggag
tgcttcaaaaccatcctgggtgccttctctgaccccaacattgacgtgtccgaccccatc
agcgaccacttctacaaggaggtgtggatggcgatatcaggacggaacgccaccatctat
gacaaggtgttcaactgtctgccgtccagcctggtgaggaacatgcaggagctcctggac
ttcaagactaggacagagctggacaaagaggaccctgctcaagctcgggagctgctgaag
aagatccgggggttcctggtccagttccccctggagttcctcagcgaggagaacctcatg
ccctccatgggcaccaaagaggccatggcacccactgagctctggacctga
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