KEGG   Clupea harengus (Atlantic herring): 105908473
Entry
105908473         CDS       T09045                                 
Name
(RefSeq) ras-related protein Rab-33B-like
  KO
K07920  Ras-related protein Rab-33B
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    105908473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105908473
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105908473
   04031 GTP-binding proteins [BR:char04031]
    105908473
Membrane trafficking [BR:char04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    105908473
 Others
  Specific organelles associated proteins
   Auto phagosome
    105908473
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   105908473
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    105908473
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA SRPRB PduV-EutP G-alpha AAA_22 AAA_24 TniB NACHT AAA_16 Septin nSTAND3
Other DBs
NCBI-GeneID: 105908473
NCBI-ProteinID: XP_012692433
Ensembl: ENSCHAG00000015145
UniProt: A0A6P3W8Q8
LinkDB
Position
22:11684625..11686904
AA seq 230 aa
MESSIEFSTSPTTNSQPTRYRFFKIVVIGDSGVGKTCLAYRFCAGRFPNKTEATIGVDFR
ERIIDIEGEKIKVQLWDTAGQERFRKSMVQQYYRSVHAIVLVFDVSNPASFRSLPLWLDE
CRRNALGQEVPRILVGNKCDLVQGSSNWGGVNSEQVQRFAEAHGMPFYLTSAKGPEGQGD
HVEAIFVSLAHRLKRQRTLLASHTPQSEALQSFMLPSKKSTEKEKWACGC
NT seq 693 nt   +upstreamnt  +downstreamnt
atggaatcctcaattgaattctccacatcacctacaacaaactcccagccgacgcgttac
cgattttttaaaattgtagtgattggggattcgggagttgggaagacgtgcctcgcgtac
cgattttgtgctgggaggtttcccaacaaaacagaggccactattggtgtcgactttcgt
gagcgaattatcgatattgaaggggaaaaaattaaggttcaactgtgggatactgcaggt
caggagcgcttccgcaagagcatggtgcagcagtactaccgcagtgtgcacgccatcgta
ctggtcttcgatgtgtccaaccctgccagcttccgtagcctgcccctgtggctggacgag
tgccggcggaacgcactgggccaggaggtgccccgcatcctcgtgggcaacaagtgcgac
ctggtgcaggggtccagtaactggggaggagtgaatagcgaacaggtgcagagatttgct
gaggcccatggtatgcccttctacctgacctcggccaaaggtcccgaaggccaaggggac
catgttgaagccatctttgtgtcactggctcacaggctgaagagacagcggacgttgttg
gcttctcacacaccacagagcgaggcacttcagagttttatgctaccatcgaaaaagagt
acggagaaggagaaatgggcctgtggctgttag

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